RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TVP23BQ9NYZ1 205 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 COPS7AQ9UBW8 275 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 A0A075B6Q4 140 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 H6PDO95479 791 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 EIF5AP63241 154 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 KCTD19Q17RG1 926 aaPredicted RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 IQCCQ4KMZ1 466 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 RGMBQ6NW40 437 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 CYP2U1Q7Z449 544 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 CPNE9Q8IYJ1 553 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 ATP6V1C2Q8NEY4 427 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 OR14C36Q8NHC7 312 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 CD320Q9NPF0 282 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 FCF1Q9Y324 198 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 SNX4O95219 450 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 POU2F1P14859 743 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 CRISP3P54108 245 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 TLR1Q15399 786 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 FAM174BQ3ZCQ3 159 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 GET4Q7L5D6 327 aaPredicted RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 NUP54Q7Z3B4 507 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 PYROXD2Q8N2H3 581 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 COX18Q8N8Q8 333 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 DCBLD1Q8N8Z6 715 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 OR2AJ1Q8NGZ0 328 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 DCAKDQ8WVC6 231 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 HIPK3Q9H422 1215 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 RBMX2Q9Y388 322 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 EFCAB9A8MZ26 197 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 C9JVG2 144 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 ECHS1P30084 290 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 TMEM214Q6NUQ4 689 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 PAMR1Q6UXH9 720 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 PLCZ1Q86YW0 608 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 OR7D4Q8NG98 312 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 C9orf43Q8TAL5 461 aaPredicted RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 KAT2AQ92830 837 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 ZSWIM3Q96MP5 696 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 WRAP53Q9BUR4 548 aaKnown RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 PCDHGC4Q9Y5F7 938 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 MAFBQ9Y5Q3 323 aaPredicted RBP20.69■□□□□ 0.9
RNF40-201ENST00000324685 ZNF208O43345 1280 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 RENP00797 406 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 PIGWQ7Z7B1 504 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 CAMK1GQ96NX5 476 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 IKZF4Q9H2S9 585 aa20.69■□□□□ 0.9
RNF40-201ENST00000324685 DAPL1A0PJW8 107 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 AQP12BA6NM10 295 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 WNT7AO00755 349 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 LSM1O15116 133 aaKnown RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 ACVR2AP27037 513 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 AVPR1BP47901 424 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 RFTN1Q14699 578 aaPredicted RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 AQP12AQ8IXF9 295 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 ZNF615Q8N8J6 731 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SUN5Q8TC36 379 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 PRICKLE1Q96MT3 831 aaPredicted RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 EHD1Q9H4M9 534 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 MED11Q9P086 117 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SNHG28P0DPA3 235 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 CARTPTQ16568 116 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 TMEM220Q6QAJ8 160 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 KLHL36Q8N4N3 616 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 OXR1Q8N573 874 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 CCDC54Q8NEL0 328 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 LRRC3Q9BY71 257 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 DPEP3Q9H4B8 488 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 DNAAF2Q9NVR5 837 aaKnown RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 DNAJB4Q9UDY4 337 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 ZNF639Q9UID6 485 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SPATA31D1Q6ZQQ2 1576 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SLC22A1O15245 554 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 NOBOXO60393 691 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SLC7A1P30825 629 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 CLCNKBP51801 687 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 EEFSECP57772 596 aaKnown RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 RASGEF1BQ0VAM2 473 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 PCED1BQ96HM7 432 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 HOXC12P31275 282 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 HSD17B2P37059 387 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 SLC1A2P43004 574 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 ERVK-21P61565 698 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 TARDBPQ13148 414 aaKnown RBP eCLIP20.68■□□□□ 0.9
RNF40-201ENST00000324685 HSDL1Q3SXM5 330 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 ZNF548Q8NEK5 533 aaPredicted RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 PPP1R14BQ96C90 147 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 POLR3BQ9NW08 1133 aaPredicted RBP20.68■□□□□ 0.9
RNF40-201ENST00000324685 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
RNF40-201ENST00000324685 MAZP56270 477 aaKnown RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 ERVK-8P63133 956 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 FBXO48Q5FWF7 155 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 ANKRD23Q86SG2 305 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 TAMM41Q96BW9 452 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SNTG1Q9NSN8 517 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 NOCTQ9UK39 431 aaKnown RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 PLOD2O00469 737 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CCL22O00626 93 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 RLN2P04090 185 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 GNAZP19086 355 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 DAOAP59103 153 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms