RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CCDC126Q96EE4 140 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 UNKQ9C0B0 810 aaKnown RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 OR2AG1Q9H205 316 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-202ENST00000324340 CDYLQ9Y232 598 aa12.5□□□□□ -0.41
DDX39A-202ENST00000324340 PLXND1Q9Y4D7 1925 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CDC7O00311 574 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 KLK8O60259 260 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 SNNO75324 88 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 ATP6V1G1O75348 118 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 H2AFYO75367 372 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 E2F6O75461 281 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 SLCO2B1O94956 709 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 MPC1LP0DKB6 136 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 UQCRBP14927 111 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 HNRNPA2B1P22626 353 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 GRK2P25098 689 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CD6P30203 668 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 NUDT1P36639 197 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 PGM1P36871 562 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CD97P48960 835 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 DNAJB13P59910 316 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 SIGLEC14Q08ET2 396 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 BST1Q10588 318 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 TSNQ15631 228 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 LIPMQ5VYY2 423 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CES4AQ5XG92 561 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 KIAA0895LQ68EN5 471 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 MTDHQ86UE4 582 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM126BQ8IUX1 230 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 RASGRP3Q8IV61 690 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 BEND7Q8N7W2 519 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 ASZ1Q8WWH4 475 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 FUBP1Q96AE4 644 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 TOE1Q96GM8 510 aaKnown RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 TAS2R1Q9NYW7 299 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 DNMT3AQ9Y6K1 912 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-202ENST00000324340 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 CUL9Q8IWT3 2517 aa12.49□□□□□ -0.41
DDX39A-202ENST00000324340 IGHV1OR15-9A0A0B4J2B8 117 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 NPEPPSL1A6NEC2 478 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SYCE1LA8MT33 242 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 A8MT66 165 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 BTN3A1O00481 513 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 TOR1BO14657 336 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SLC31A1O15431 190 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 IPO13O94829 963 aaKnown RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SERPINE1P05121 402 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 ARFIP2P53365 341 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SESN3P58005 492 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 KIAA1024LP59773 190 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 STX3Q13277 289 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM31Q5JXX7 168 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SBSNQ6UWP8 590 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 XKR5Q6UX68 686 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 IZUMO2Q6UXV1 221 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 C11orf96Q7Z7L8 435 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 ADAMTSL2Q86TH1 951 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 PDSS2Q86YH6 399 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SLC22A9Q8IVM8 553 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 OXR1Q8N573 874 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM145Q8NBT3 493 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 ELMO1Q92556 727 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 FOXJ1Q92949 421 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 GLMNQ92990 594 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 C7orf26Q96N11 449 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 APOOQ9BUR5 198 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 Q9H521 79 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 C6orf106Q9H6K1 298 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-202ENST00000324340 RMI1Q9H9A7 625 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 DMTF1Q9Y222 760 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 HS3ST3A1Q9Y663 406 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 NUMA1Q14980 2115 aa12.48□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM202A6NGA9 273 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM114B3SHH9 223 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 K7ESF4 209 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 STK25O00506 426 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 FPGTO14772 594 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 CXCL12P48061 93 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 CHN2P52757 468 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms