RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SCARB2Q14108 478 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 UBXN11Q5T124 520 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RANBP3LQ86VV4 465 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CLIP4Q8N3C7 705 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC35F5Q8WV83 523 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PIK3R3Q92569 461 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 OR52B2Q96RD2 323 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CDADC1Q9BWV3 514 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 IL36AQ9UHA7 158 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 CLEC4AQ9UMR7 237 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TMA7Q9Y2S6 64 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RPL17P18621 184 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RPS6KA3P51812 740 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 MBLAC2Q68D91 279 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 DDX1Q92499 740 aaKnown RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SHISA4Q96DD7 197 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 H0YGN5 161 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TFECO14948 347 aaPredicted RBP10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 FOXM1Q08050 763 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TYSND1Q2T9J0 566 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 TRPV1Q8NER1 839 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 RFKQ969G6 155 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 ABCB8Q9NUT2 735 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 ERVW-1Q9UQF0 538 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 HS3ST4Q9Y661 456 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
SNRNP200-201ENST00000323853 IGFBP4P22692 258 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 FMO3P31513 532 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 TRIM32Q13049 653 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM198Q66K66 360 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PJA1Q8NG27 643 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 LRRC15Q8TF66 581 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 MTRRQ9UBK8 725 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 IRAK3Q9Y616 596 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 NME6O75414 186 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 CCNKO75909 580 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RASGRP1O95267 797 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 NR4A1P22736 598 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 SEPHS1P49903 392 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 SEC13P55735 322 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 STXBP1P61764 594 aaKnown RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 CADM2Q8N3J6 435 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 FCGR1BQ92637 280 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 LMLNQ96KR4 655 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 FEM1AQ9BSK4 669 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 DSN1Q9H410 356 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 MINDY3Q9H8M7 445 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC35C2Q9NQQ7 365 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PCDHGA11Q9Y5H2 935 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 POU2F1P14859 743 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 STARP49675 285 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 GAD2Q05329 585 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 DPY19L1Q2PZI1 675 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PAQR3Q6TCH7 311 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RNF19BQ6ZMZ0 732 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RTL4Q6ZR62 310 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 LRRC70Q7Z2Q7 622 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 HID1Q8IV36 788 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RAB2BQ8WUD1 216 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 SUSD3Q96L08 255 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 ELL3Q9HB65 397 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 FAM53CQ9NYF3 392 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 GMFGO60234 142 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 DHFRP00374 187 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 VIPP01282 170 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 MAGP20916 626 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 DGKGP49619 791 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PDE12Q6L8Q7 609 aaKnown RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 KLHDC10Q6PID8 442 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 AHI1Q8N157 1196 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 OXR1Q8N573 874 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PACRGLQ8N7B6 248 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 TSEN15Q8WW01 171 aaKnown RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RPL10LQ96L21 214 aaKnown RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 ZIM2Q9NZV7 527 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 ITPKBP27987 946 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 WASP42768 502 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PRR5P85299 388 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 PCLAFQ15004 111 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 ZFP69Q49AA0 526 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 GLIS1Q8NBF1 620 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 OR14C36Q8NHC7 312 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 ING5Q8WYH8 240 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 NUS1Q96E22 293 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 CKLFQ9UBR5 152 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 RWDD3Q9Y3V2 267 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 FAM25EA8MYX2 175 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 AOC1P19801 751 aa10.72□□□□□ -0.69
SNRNP200-201ENST00000323853 EFNA1P20827 205 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms