RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 MPLP40238 635 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 SERPINB4P48594 390 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 AP1S2P56377 157 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 C1orf61Q13536 156 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 TGFBIQ15582 683 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 RPE65Q16518 533 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 TRIM61Q5EBN2 209 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 PLA2G2CQ5R387 149 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 TAF8Q7Z7C8 310 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 CCDC63Q8NA47 563 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF548Q8NEK5 533 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-201ENST00000320054 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-201ENST00000320054 MDM1Q8TC05 714 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 MAGEC3Q8TD91 643 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 MCOLN3Q8TDD5 553 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 LMX1AQ8TE12 382 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 DLG3Q92796 817 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 CCDC126Q96EE4 140 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 C12orf66Q96MD2 445 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-201ENST00000320054 MVB12BQ9H7P6 319 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 NUDT4Q9NZJ9 180 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 CPSF2Q9P2I0 782 aaKnown RBP13.27□□□□□ -0.29
PRPF18-201ENST00000320054 COPG2Q9UBF2 871 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 PDE10AQ9Y233 779 aa13.27□□□□□ -0.29
PRPF18-201ENST00000320054 ARID1BQ8NFD5 2236 aaPredicted RBP13.27□□□□□ -0.29
PRPF18-201ENST00000320054 KIR2DS5A0A0G2JLQ3 304 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 A0A0G2JNG1 304 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 A0A1B0GTQ1 180 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PABPN1LA6NDY0 278 aaKnown RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 KIR2DS3K7RE56 304 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 ARHGAP33O14559 1287 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 FFAR2O15552 330 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 KLK8O60259 260 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 SMIM24O75264 130 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 EML2O95834 649 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 BPGMP07738 259 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 RETP07949 1114 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 CELA2BP08218 269 aaPredicted RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 MTHFD2P13995 350 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 CHN1P15882 459 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 ATP5F1P24539 256 aaPredicted RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 MAP4P27816 1152 aaKnown RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 NDUFS1P28331 727 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 RPIAP49247 311 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PRKAA2P54646 552 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 IRX4P78413 519 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 NFKB2Q00653 900 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 KIR2DS5Q14953 304 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 CLCA4Q14CN2 919 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PCLAFQ15004 111 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 SHBQ15464 509 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PHKG1Q16816 387 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 HLA-BQ31612 363 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 TTC23LQ6PF05 361 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 IYDQ6PHW0 289 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 DCUN1D3Q8IWE4 304 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 TBC1D21Q8IYX1 336 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 SUMF1Q8NBK3 374 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PDPRQ8NCN5 879 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 OR5K2Q8NHB8 316 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 CFAP61Q8NHU2 1237 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 HIST1H2AJQ99878 128 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 ARRDC1-AS1Q9H2J1 176 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 TRIT1Q9H3H1 467 aaKnown RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 CAAP1Q9H8G2 361 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 INTS9Q9NV88 658 aaKnown RBP13.26□□□□□ -0.29
PRPF18-201ENST00000320054 ASF1AQ9Y294 204 aa13.26□□□□□ -0.29
PRPF18-201ENST00000320054 PATE3B3GLJ2 98 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 SUPT3HB4E1H0 165 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 UBXN8O00124 270 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 MYO1CO00159 1063 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 KHNYNO15037 678 aaKnown RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 YY2O15391 372 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 DLX3O60479 287 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 SUPT3HO75486 399 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 CER1O95813 267 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 S100BP04271 92 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 ANXA6P08133 673 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 EPHA8P29322 1005 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 IL9RQ01113 521 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 ASPHQ12797 758 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 PRAMEF14Q5SWL7 426 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 KANSL1Q7Z3B3 1105 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 SLC22A9Q8IVM8 553 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 TCAIMQ8N3R3 496 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 FAM46DQ8NEK8 389 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 MGARPQ8TDB4 240 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 ZFPM2Q8WW38 1151 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms