RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ACAP2Q15057 778 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF544Q6NX49 715 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 C16orf59Q7L2K0 433 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 TAC4Q86UU9 113 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 LIX1Q8N485 282 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 FAM83FQ8NEG4 500 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-201ENST00000317716 SCAMP5Q8TAC9 235 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 SOCS4Q8WXH5 440 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 SNX27Q96L92 541 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 RBM38Q9H0Z9 239 aaKnown RBP7.41□□□□□ -1.22
CDHR3-201ENST00000317716 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 COMMD3Q9UBI1 195 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 DNAJB9Q9UBS3 223 aa7.41□□□□□ -1.22
CDHR3-201ENST00000317716 A0A0C4DFX4 3053 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MYADML2A6NDP7 307 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 SLC1A7O00341 560 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 IFRD1O00458 451 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MYL12BO14950 172 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 BEST1O76090 585 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 CHRNA1P02708 482 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 PBLDP30039 288 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 PRDX3P30048 256 aaKnown RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 CHI3L1P36222 383 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 BRCC3P46736 316 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 NOVP48745 357 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 ALDH7A1P49419 539 aaKnown RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MBTD1Q05BQ5 628 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 LRP8Q14114 963 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 SPANXN4Q5MJ08 99 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 DOK6Q6PKX4 331 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 RNF180Q86T96 592 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 TRIM69Q86WT6 500 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 LSMEM2Q8N112 164 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 CELF2-AS1Q8N7Q2 184 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 OR4L1Q8NH43 312 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 GTF3C2Q8WUA4 911 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MED8Q96G25 268 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 DSN1Q9H410 356 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 IPPKQ9H8X2 491 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 FAM118AQ9NWS6 357 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MARCH4Q9P2E8 410 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 LRFN2Q9ULH4 789 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MAFBQ9Y5Q3 323 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 ARID1AO14497 2285 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 A0A1W2PP18 115 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MGAT4DA6NG13 374 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 FHP07954 510 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 TGFB3P10600 412 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 HERVK_113P63132 956 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 NCF4Q15080 339 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 RBM48Q5RL73 367 aaKnown RBP7.4□□□□□ -1.22
CDHR3-201ENST00000317716 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 HID1Q8IV36 788 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 PHC2Q8IXK0 858 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 STK40Q8N2I9 435 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 SLC35F5Q8WV83 523 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 RNFT2Q96EX2 444 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MYRFLQ96LU7 910 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 GPR20Q99678 358 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 ERVK-6Q9BXR3 956 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 DUSP16Q9BY84 665 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 MMP28Q9H239 520 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 ATP13A3Q9H7F0 1226 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 ARL15Q9NXU5 204 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 NOX1Q9Y5S8 564 aa7.4□□□□□ -1.22
CDHR3-201ENST00000317716 KIAA1551Q9HCM1 1747 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 DICER1Q9UPY3 1922 aaKnown RBP7.4□□□□□ -1.23
CDHR3-201ENST00000317716 LAMA3Q16787 3333 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 RGS14O43566 566 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 TPST2O60704 377 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 EPN2O95208 641 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 C9P02748 559 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 ITGB1P05556 798 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 ASGR1P07306 291 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 C8BP07358 591 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 ALDOCP09972 364 aaKnown RBP7.4□□□□□ -1.23
CDHR3-201ENST00000317716 WEE1P30291 646 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 CDH5P33151 784 aaPredicted RBP7.4□□□□□ -1.23
CDHR3-201ENST00000317716 PTGS2P35354 604 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 OR1G1P47890 313 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 SCNN1GP51170 649 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 CDH12P55289 794 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 CAP1Q01518 475 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 FCHO2Q0JRZ9 810 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 RFTN1Q14699 578 aaPredicted RBP7.4□□□□□ -1.23
CDHR3-201ENST00000317716 KCNA10Q16322 511 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 KYAT1Q16773 422 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 PHKG1Q16816 387 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 INAVAQ3KP66 663 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 SLC36A3Q495N2 470 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 TSTD2Q5T7W7 516 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 CES5AQ6NT32 575 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 CYP20A1Q6UW02 462 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 TMEM126BQ8IUX1 230 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 SLC13A3Q8WWT9 602 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 PSMG2Q969U7 264 aa7.4□□□□□ -1.23
CDHR3-201ENST00000317716 TP53INP1Q96A56 240 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms