RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GPR17Q13304 367 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 FASTKQ14296 549 aaKnown RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 VPS26BQ4G0F5 336 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 RTP2Q5QGT7 225 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ZFYVE27Q5T4F4 411 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ITPRIPL1Q6GPH6 555 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 FRMPD2BQ6IN97 320 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ENPP6Q6UWR7 440 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CEP68Q76N32 757 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 PCYOX1LQ8NBM8 494 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 SLC26A7Q8TE54 656 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 CYGBQ8WWM9 190 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF707Q96C28 371 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 AURKBQ96GD4 344 aaPredicted RBP7.67□□□□□ -1.18
CNOT4-201ENST00000315544 MPP4Q96JB8 637 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 TBATAQ96M53 351 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 LHX9Q9NQ69 397 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ERGIC3Q9Y282 383 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF711Q9Y462 761 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 UGT2A1Q9Y4X1 527 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 PCDHGA3Q9Y5H0 932 aa7.67□□□□□ -1.18
CNOT4-201ENST00000315544 OR2A25A4D2G3 310 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 FAM220BPB1ANY3 271 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 WASH3PC4AMC7 463 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CCL22O00626 93 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 SYN3O14994 580 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HOXA2O43364 376 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TIPRLO75663 272 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 DNAJB5O75953 348 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TBX18O95935 607 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 FCARP24071 287 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HMGCLP35914 325 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ARL4AP40617 200 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ARSFP54793 590 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 YBEYP58557 167 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ZBTB16Q05516 673 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TRIP10Q15642 601 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MPPE1Q53F39 396 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 SAMD4BQ5PRF9 694 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CBR4Q8N4T8 237 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TRUB1Q8WWH5 349 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HDAC2Q92769 488 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 DTNBP1Q96EV8 351 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ZYG11BQ9C0D3 744 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TASP1Q9H6P5 420 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MAGED2Q9UNF1 606 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 PIN4Q9Y237 131 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 BTBD3Q9Y2F9 522 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 NOP56O00567 594 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 FOXS1O43638 330 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MRPS14O60783 128 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CLPTM1O96005 669 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 UROSP10746 265 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CD52P31358 61 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 GLRBP48167 497 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 C16orf72Q14CZ0 275 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MMEL1Q495T6 779 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 B3GNT8Q7Z7M8 397 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HID1Q8IV36 788 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CATSPER1Q8NEC5 780 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 SYNPO2LQ9H987 977 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CLEC4EQ9ULY5 219 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ASPMQ8IZT6 3477 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HEATR5BQ9P2D3 2071 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CD3EAPO15446 510 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 STC2O76061 302 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 KCNK5O95279 499 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MTHFD1P11586 935 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 MYOGP15173 224 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 HLA-DPA1P20036 260 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 IRS1P35568 1242 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 SESN3P58005 492 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 IGBP1P78318 339 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 LAMB3Q13751 1172 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 KEAP1Q14145 624 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF829Q3KNS6 432 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CATSPEREQ5SY80 951 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ASTLQ6HA08 431 aaPredicted RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 CES5AQ6NT32 575 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 SCYL2Q6P3W7 929 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 PNPT1Q8TCS8 783 aaKnown RBP7.66□□□□□ -1.18
CNOT4-201ENST00000315544 EEF1AKMT1Q8WVE0 214 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 COQ8BQ96D53 544 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 OR4K3Q96R72 315 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 OSBPL6Q9BZF3 934 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ACPTQ9BZG2 426 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 BFARQ9NZS9 450 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 DSEQ9UL01 958 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 NDUFAF1Q9Y375 327 aa7.66□□□□□ -1.18
CNOT4-201ENST00000315544 ZNF840PA6NDX5 716 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CREB3O43889 395 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 GPC4O75487 556 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CLIC3O95833 236 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 FGF1P05230 155 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 HOXB8P17481 243 aaPredicted RBP7.65□□□□□ -1.18
CNOT4-201ENST00000315544 SYN1P17600 705 aa7.65□□□□□ -1.18
CNOT4-201ENST00000315544 CCR1P32246 355 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms