RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CLCN7P51798 805 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 GPLD1P80108 840 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 ZNF460Q14592 562 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 WDR36Q8NI36 951 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SKA2Q8WVK7 121 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 TMEM159Q96B96 161 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 NXPE2Q96DL1 559 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 TMEM74Q96NL1 305 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 GPR21Q99679 349 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 UNKQ9C0B0 810 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 STN1Q9H668 368 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SDK2Q58EX2 2172 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SNRNP200O75643 2136 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SPTBP11277 2137 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 MAGEB16A2A368 324 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 CDRT15L2A8MXV6 281 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 E7ESA3 106 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 KCNJ13O60928 360 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 FAM155BO75949 473 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 C1QAP02745 245 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 C9P02748 559 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 JMJD7P0C870 316 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SLC2A4P14672 509 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 PAMP19021 973 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 OGNP20774 298 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 ARL4CP56559 192 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SQSTM1Q13501 440 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 TBC1D25Q3MII6 688 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 AARS2Q5JTZ9 985 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 C8orf74Q6P047 294 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 OTOAQ7RTW8 1153 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SDCCAG8Q86SQ7 713 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 CPNE9Q8IYJ1 553 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SLC22A15Q8IZD6 547 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 LINC01555Q8NAE3 123 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 C2CD4AQ8NCU7 369 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 LCN9Q8WX39 176 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SH3KBP1Q96B97 665 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 OLFM1Q99784 485 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 ZDHHC18Q9NUE0 388 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 GNPTGQ9UJJ9 305 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 MN1Q10571 1320 aaPredicted RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 GSAPA4D1B5 854 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 OR5K3A6NET4 321 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 SLCO2B1O94956 709 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 FOLR1P15328 257 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 SAT1P21673 171 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 PSMB5P28074 263 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 EPHA4P54764 986 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 FASTKQ14296 549 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 KLHL38Q2WGJ6 581 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 TMEM207Q6UWW9 146 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 PIWIL4Q7Z3Z4 852 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 ADGRF3Q8IZF5 1079 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 DLG3Q92796 817 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 CMKLR1Q99788 373 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 AKIRIN1Q9H9L7 192 aaPredicted RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 AHCTF1Q8WYP5 2266 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 WT1P19544 449 aaPredicted RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 MCM3P25205 808 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 ECHS1P30084 290 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 FOXM1Q08050 763 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 ZIC1Q15915 447 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 WHAMMP3Q1A5X7 153 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 DNAJC21Q5F1R6 531 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 SPANXN3Q5MJ09 141 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 STEAP4Q687X5 459 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 PPFIBP2Q8ND30 876 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 FLVCR1-AS1Q8TAF5 88 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 CD200R1Q8TD46 325 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 MRRFQ96E11 262 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 RUNDC3BQ96NL0 473 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 TTC1Q99614 292 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 SRMSQ9H3Y6 488 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 VPS37BQ9H9H4 285 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 FAM60AQ9NP50 221 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 WHRNQ9P202 907 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 ADAMTS6Q9UKP5 1117 aa11.69□□□□□ -0.54
SCFD1-201ENST00000311943 UTP11Q9Y3A2 253 aaKnown RBP11.69□□□□□ -0.54
SCFD1-201ENST00000311943 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
SCFD1-201ENST00000311943 SLC9B1P1A6NJY1 282 aa11.68□□□□□ -0.54
SCFD1-201ENST00000311943 EFSO43281 561 aa11.68□□□□□ -0.54
SCFD1-201ENST00000311943 APOA4P06727 396 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms