RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 OR2T12Q8NG77 320 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 OR52E6Q96RD3 313 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 UHRF1Q96T88 793 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 NDUFA13Q9P0J0 144 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 B4GALT6Q9UBX8 382 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 ZNF821O75541 412 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 PIM1P11309 404 aaPredicted RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 RFC2P35250 354 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 MAPK8P45983 427 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 CCT8P50990 548 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 EEFSECP57772 596 aaKnown RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 NAA20P61599 178 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 FAM86B1Q8N7N1 296 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 TCEAL4Q96EI5 215 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 PDLIM5Q96HC4 596 aaKnown RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 BRD9Q9H8M2 597 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 ASAH2Q9NR71 780 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
PTPN2-201ENST00000309660 FADS3Q9Y5Q0 445 aa11.31□□□□□ -0.6
PTPN2-201ENST00000309660 SOCS5O75159 536 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 EFEMP2O95967 443 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 GLUD1P00367 558 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 HALP42357 657 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 GRIK2Q13002 908 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 ZNF697Q5TEC3 545 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 DLEU7Q6UYE1 221 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 VRK3Q8IV63 474 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 DHRSXQ8N5I4 330 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TSPEARQ8WU66 669 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 FAM162AQ96A26 154 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CLK4Q9HAZ1 481 aaKnown RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 SLC25A13Q9UJS0 675 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 INVSQ9Y283 1065 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 GOLGA4Q13439 2230 aaKnown RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 H3BNH8 94 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PGRP06401 933 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 EFNA1P20827 205 aaPredicted RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 RPS9P46781 194 aaKnown RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PTSQ03393 145 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TMTC4Q5T4D3 741 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 SUSD1Q6UWL2 747 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 B3GNT6Q6ZMB0 384 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TBC1D21Q8IYX1 336 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 SCRN2Q96FV2 425 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 KCTD5Q9NXV2 234 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PKD2L2Q9NZM6 624 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 SLC22A14Q9Y267 594 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 U3KQV3 271 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 MANBAO00462 879 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CLDN9O95484 217 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 OR56A5P0C7T3 313 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 FCGR1AP12314 374 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CD9P21926 228 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PSMA3P25788 255 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 ITGB8P26012 769 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PCSK6P29122 969 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PBLDP30039 288 aaPredicted RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CCR2P41597 374 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 MAPK10P53779 464 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PTCHD3Q3KNS1 767 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 AP1ARQ63HQ0 302 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 TBPL2Q6SJ96 375 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 DUS3LQ96G46 650 aaKnown RBP11.3□□□□□ -0.6
PTPN2-201ENST00000309660 EBPLQ9BY08 206 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 ZDHHC3Q9NYG2 299 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
PTPN2-201ENST00000309660 LATS1O95835 1130 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 KRT6AP02538 564 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 KRT6BP04259 564 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 CAPNS1P04632 268 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ANXA6P08133 673 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 XPAP23025 273 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 RPS3P23396 243 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 KRT6CP48668 564 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 IL1RL1Q01638 556 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 PWP1Q13610 501 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 APOFQ13790 326 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 PLPP4Q5VZY2 271 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 Q6ZVL8 140 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms