RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 C2orf74A8MZ97 194 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 TMEM150CB9EJG8 249 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 MAP3K7O43318 606 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 OR1I1O60431 355 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 OR56A5P0C7T3 313 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 ZSCAN5DPP0CG00 497 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 ADRA1DP25100 572 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 RPS15P62841 145 aaKnown RBP18.93■□□□□ 0.62
LIME1-201ENST00000309546 PRAMEP78395 509 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 TLE1Q04724 770 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 SEMA5AQ13591 1074 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 LACTB2Q53H82 288 aaPredicted RBP18.93■□□□□ 0.62
LIME1-201ENST00000309546 LYPLAL1Q5VWZ2 237 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 HOOK3Q86VS8 718 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 PPHLN1Q8NEY8 458 aaKnown RBP18.93■□□□□ 0.62
LIME1-201ENST00000309546 CLIP3Q96DZ5 547 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 ZNF778Q96MU6 729 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 RANBP9Q96S59 729 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 CASS4Q9NQ75 786 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 LATS2Q9NRM7 1088 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 PAK5Q9P286 719 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 ICKQ9UPZ9 632 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 MAN2B2Q9Y2E5 1009 aa18.93■□□□□ 0.62
LIME1-201ENST00000309546 TDRKHQ9Y2W6 561 aaKnown RBP18.93■□□□□ 0.62
LIME1-201ENST00000309546 TENM4Q6N022 2769 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 KLK3P07288 261 aaPredicted RBP18.92■□□□□ 0.62
LIME1-201ENST00000309546 CYP2A7P20853 494 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 PTPN4P29074 926 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 CSRP3P50461 194 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 ABRQ12979 859 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 FASTKD1Q53R41 847 aaKnown RBP18.92■□□□□ 0.62
LIME1-201ENST00000309546 ADGRF3Q8IZF5 1079 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 SLC38A9Q8NBW4 561 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 OR4L1Q8NH43 312 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 OR1L3Q8NH93 324 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 CPT1BQ92523 772 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 GPR87Q9BY21 358 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 PITPNM3Q9BZ71 974 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 SLC7A5P2Q9GIP4 190 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 TP53TG5Q9Y2B4 290 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 TCAF1Q9Y4C2 921 aa18.92■□□□□ 0.62
LIME1-201ENST00000309546 F8W8V4 182 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 MKRN2OSH3BPM6 223 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 RFPL1O75677 317 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 CCDC175P0C221 793 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 NR1D1P20393 614 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 SHMT2P34897 504 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 RPL22P35268 128 aaKnown RBP18.91■□□□□ 0.62
LIME1-201ENST00000309546 BASP1P80723 227 aaKnown RBP18.91■□□□□ 0.62
LIME1-201ENST00000309546 SPESP1Q6UW49 350 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 ZNF534Q76KX8 674 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 NLRP9Q7RTR0 991 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 TRIM73Q86UV7 250 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 UBE2Q2Q8WVN8 375 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 TRAPPC9Q96Q05 1148 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 EPN3Q9H201 632 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 CHST8Q9H2A9 424 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 PLAGL1Q9UM63 463 aa18.91■□□□□ 0.62
LIME1-201ENST00000309546 SLC5A10A0PJK1 596 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 UGT2B7P16662 529 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 ACADLP28330 430 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 PMS2P54278 862 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 SESN2P58004 480 aaPredicted RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 IL10RAQ13651 578 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 SEMA3AQ14563 771 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 SIX1Q15475 284 aaPredicted RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 CCNG2Q16589 344 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 COLEC12Q5KU26 742 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 UNC5AQ6ZN44 842 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 GSTA5Q7RTV2 222 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 SYVN1Q86TM6 617 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 LDB1Q86U70 411 aaPredicted RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 TBC1D21Q8IYX1 336 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 SEC14L1Q92503 715 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 N4BP2L2Q92802 583 aaPredicted RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 ACTR5Q9H9F9 607 aaPredicted RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 SYTL2Q9HCH5 934 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 ANAPC5Q9UJX4 755 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 ANAPC2Q9UJX6 822 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 RIMKLBQ9ULI2 386 aa18.9■□□□□ 0.62
LIME1-201ENST00000309546 FARSAQ9Y285 508 aaKnown RBP18.9■□□□□ 0.62
LIME1-201ENST00000309546 BHMG1C9JSJ3 638 aaPredicted RBP18.89■□□□□ 0.61
LIME1-201ENST00000309546 MEN1O00255 615 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 DNAJB5O75953 348 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 FGGP02679 453 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 CHRM5P08912 532 aaPredicted RBP18.89■□□□□ 0.61
LIME1-201ENST00000309546 ITGA1P56199 1179 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 CRADDP78560 199 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 ACVR1Q04771 509 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 UGT8Q16880 541 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 PLEKHS1Q5SXH7 462 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 LCN10Q6JVE6 187 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 CDHR3Q6ZTQ4 885 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 C19orf47Q8N9M1 422 aaKnown RBP18.89■□□□□ 0.61
LIME1-201ENST00000309546 OR5K2Q8NHB8 316 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 LKAAEAR1Q8TD35 194 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 LRFN5Q96NI6 719 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 TSSK1BQ9BXA7 367 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms