RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 C2orf54Q08AI8 447 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 TRAP1Q12931 704 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 LRRC14Q15048 493 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ACOX1Q15067 660 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 TAF1AQ15573 450 aaPredicted RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 DUOXA1Q1HG43 343 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ERCC6LQ2NKX8 1250 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IZUMO3Q5VZ72 239 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ESRP1Q6NXG1 681 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 LRRC8BQ6P9F7 803 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GCNT7Q6ZNI0 430 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 Q6ZVL8 140 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 NCCRP1Q6ZVX7 275 aaPredicted RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 ZNF534Q76KX8 674 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ZNF765Q7L2R6 523 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 CPOQ8IVL8 374 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ARL14Q8N4G2 192 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ZCCHC9Q8N567 271 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 GOLM1Q8NBJ4 401 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MCUQ8NE86 351 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 DTX3LQ8TDB6 740 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 SLC5A11Q8WWX8 675 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 BMFQ96LC9 184 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 SLC6A18Q96N87 628 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 FERD3LQ96RJ6 166 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GPR63Q9BZJ6 419 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 L2HGDHQ9H9P8 463 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GPR27Q9NS67 375 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 KRT84Q9NSB2 600 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IL17CQ9P0M4 197 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IL19Q9UHD0 177 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GMEB2Q9UKD1 530 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PTPRZ1P23471 2315 aaPredicted RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 PIEZO1Q92508 2521 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ZNF106Q9H2Y7 1883 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 CFAP54Q96N23 3096 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 hCG_1807616A0A1W2PRN6 198 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 FAM187AA6NFU0 413 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MROH6A6NGR9 719 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 H0YIV9 168 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 NDUFAB1O14561 156 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 DNALI1O14645 258 aaPredicted RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 FPGTO14772 594 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 TP73O15350 636 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 RAD51CO43502 376 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 WNT1P04628 370 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ZNF806P0C7X5 589 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 CDK4P11802 303 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MLNP12872 115 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IL10P22301 178 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MAGEA3P43357 314 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 CSNK1EP49674 416 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 ARHGDIBP52566 201 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PFN3P60673 137 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PDE1BQ01064 536 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 FOXO1Q12778 655 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GNA13Q14344 377 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IRF4Q15306 451 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 RNASEH2BQ5TBB1 312 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 ANKRD22Q5VYY1 191 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 DENND2CQ68D51 928 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PNCKQ6P2M8 343 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 LRIG3Q6UXM1 1119 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 KYAT3Q6YP21 454 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 RFLNAQ6ZTI6 216 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 GLT6D1Q7Z4J2 308 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 CDH26Q8IXH8 852 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PPIL6Q8IXY8 311 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 KRT78Q8N1N4 520 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MMGT1Q8N4V1 131 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 DNAAF3Q8N9W5 541 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 BLOC1S5Q8TDH9 187 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 NUS1Q96E22 293 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 RANBP9Q96S59 729 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ERP44Q9BS26 406 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 SORBS1Q9BX66 1292 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 ABCG8Q9H221 673 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 DENND2DQ9H6A0 471 aaPredicted RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 XKR8Q9H6D3 395 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 FZD3Q9NPG1 666 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 MBNL1Q9NR56 388 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 RAD18Q9NS91 495 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
CHD6-201ENST00000309279 PKD2L2Q9NZM6 624 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 ASIC3Q9UHC3 531 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 SLC6A14Q9UN76 642 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 PCDHGB2Q9Y5G2 931 aa8.11□□□□□ -1.11
CHD6-201ENST00000309279 TNPO3Q9Y5L0 923 aaKnown RBP8.11□□□□□ -1.11
CHD6-201ENST00000309279 TP53BP1Q12888 1972 aaPredicted RBP8.1□□□□□ -1.11
CHD6-201ENST00000309279 DMXL1Q9Y485 3027 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 ADAMTS9Q9P2N4 1935 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 ATXN2Q99700 1313 aaKnown RBP8.1□□□□□ -1.11
CHD6-201ENST00000309279 PATE3B3GLJ2 98 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 H0Y8X5 98 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 K7ESM1 405 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 TLR4O00206 839 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 HDAC3O15379 428 aa8.1□□□□□ -1.11
CHD6-201ENST00000309279 SULT1B1O43704 296 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms