RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PRR35P0CG20 571 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 GRK3P35626 688 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ZFP36L2P47974 494 aaKnown RBP10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ARPP19P56211 112 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 IHHQ14623 411 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 DDR2Q16832 855 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 C10orf120Q5SQS8 335 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 MANEALQ5VSG8 457 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 CES5AQ6NT32 575 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 LRRTM3Q86VH5 581 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 UMODL1-AS1Q8N2C9 162 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PGBD5Q8N414 524 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 KRTCAP2Q8N6L1 136 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ARRDC2Q8TBH0 407 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 SMIM14Q96QK8 99 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PSD2Q9BQI7 771 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 ACBD6Q9BR61 282 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 IKZF5Q9H5V7 419 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 PRDM8Q9NQV8 689 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 WWOXQ9NZC7 414 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 SBF1O95248 1867 aa10.95□□□□□ -0.66
PTPN7-201ENST00000309017 BRWD3Q6RI45 1802 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 RGS14O43566 566 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 AIREO43918 545 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 HSMCR30P0CW71 290 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 MC4RP32245 332 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 SLC39A12Q504Y0 691 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 B3GNT8Q7Z7M8 397 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CFAP52Q8N1V2 620 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 MFSD4AQ8N468 514 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TTC29Q8NA56 475 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF548Q8NEK5 533 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 C17orf50Q8WW18 174 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF382Q96SR6 550 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ALOXE3Q9BYJ1 711 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CSNK1G1Q9HCP0 422 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ATP13A1Q9HD20 1204 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PDP1Q9P0J1 537 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 A6NL46 340 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CCNKO75909 580 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 NDST3O95803 873 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PGRP06401 933 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 HOXC13P31276 330 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PBX3P40426 434 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PSEN2P49810 448 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 GTF2H2Q13888 395 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CBX2Q14781 532 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PTRHD1Q6GMV3 140 aaKnown RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 FBXL22Q6P050 247 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 GTF2H2CQ6P1K8 395 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TMC5Q6UXY8 1006 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 OR10T2Q8NGX3 314 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 EFHD2Q96C19 240 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CINPQ9BW66 212 aaPredicted RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TRIT1Q9H3H1 467 aaKnown RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 GORASP2Q9H8Y8 452 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PARVBQ9HBI1 364 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 KRT84Q9NSB2 600 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ST3GAL5Q9UNP4 418 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 SAMHD1Q9Y3Z3 626 aaKnown RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ACTL7AQ9Y615 435 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 LINC00854A0A1B0GVQ3 168 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 SLC12A8A0AV02 714 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 C17orf102A2RUQ5 167 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 MGEA5O60502 916 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PEX11BO96011 259 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 OTCP00480 354 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 EIF2S1P05198 315 aaKnown RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PCMT1P22061 227 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF404Q494X3 552 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 CYP2U1Q7Z449 544 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 GOLGA7Q7Z5G4 137 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 SCD5Q86SK9 330 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 IGSF8Q969P0 613 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 ROGDIQ9GZN7 287 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TPK1Q9H3S4 243 aa10.94□□□□□ -0.66
PTPN7-201ENST00000309017 TMA7Q9Y2S6 64 aaKnown RBP10.94□□□□□ -0.66
PTPN7-201ENST00000309017 PLXNA1Q9UIW2 1896 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 LOC285095A0A1B0GVY8 99 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 E2F3O00716 465 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TLR5O60602 858 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 RFPL2O75678 378 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 PRSS23O95084 383 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 GDF5P43026 501 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 HK3P52790 923 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 DEFA1P59665 94 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 DEFA3P59666 94 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 CYP4F2P78329 520 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 RAVER1Q8IY67 606 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 RHOXF1Q8NHV9 184 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms