RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 GALNT1Q10472 559 aaPredicted RBP13.23□□□□□ -0.29
SEC23A-201ENST00000307712 PHF10Q8WUB8 498 aaKnown RBP13.23□□□□□ -0.29
SEC23A-201ENST00000307712 ZNF599Q96NL3 588 aa13.23□□□□□ -0.29
SEC23A-201ENST00000307712 MYOCQ99972 504 aa13.23□□□□□ -0.29
SEC23A-201ENST00000307712 TEX12Q9BXU0 123 aa13.23□□□□□ -0.29
SEC23A-201ENST00000307712 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
SEC23A-201ENST00000307712 USP3Q9Y6I4 520 aa13.23□□□□□ -0.29
SEC23A-201ENST00000307712 ARL5CA6NH57 179 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 KCNE1P15382 129 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 HUNKP57058 714 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 YBEYP58557 167 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 OLR1P78380 273 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TAF1CQ15572 869 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PYDC2Q56P42 97 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 FBXL22Q6P050 247 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 MAMDC4Q6UXC1 1216 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PLEKHG7Q6ZR37 379 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PTCHD4Q6ZW05 846 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TOR4AQ9NXH8 423 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 FAM220BPB1ANY3 271 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 FFAR2O15552 330 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 EMX2Q04743 252 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 SPATS1Q496A3 300 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 FAM219BQ5XKK7 198 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 FAM131AQ6UXB0 335 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TICAM1Q8IUC6 712 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 NDNFQ8TB73 568 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 L3HYPDHQ96EM0 354 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 MAELQ96JY0 434 aaKnown RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 RDH12Q96NR8 316 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 NSUN3Q9H649 340 aaKnown RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 SERPINB7O75635 380 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PAPSS2O95340 614 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 MATN4O95460 622 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PBLDP30039 288 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 HTR6P50406 440 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 CASP9P55211 416 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 ALFQ53S48 1182 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 TTC23LQ6PF05 361 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PELI3Q8N2H9 469 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PRRG3Q9BZD7 231 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 ABCB9Q9NP78 766 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 PCDHGA11Q9Y5H2 935 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
SEC23A-201ENST00000307712 CRHBPP24387 322 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 GPR15P49685 360 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 EMP3P54852 163 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ARPC4P59998 168 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 QPRTQ15274 297 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 GPR162Q16538 588 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ZNF544Q6NX49 715 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 USP43Q70EL4 1123 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 IMP4Q96G21 291 aaKnown RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 TSPAN18Q96SJ8 248 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 TNFRSF12AQ9NP84 129 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 VPS4AQ9UN37 437 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ILVBLA1L0T0 632 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 UBFD1O14562 309 aaKnown RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ARCN1P48444 511 aaKnown RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 KCNC1P48547 511 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 SMYD5Q6GMV2 418 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 SLC16A10Q8TF71 515 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 PYURFQ96I23 114 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
SEC23A-201ENST00000307712 YIPF2Q9BWQ6 316 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 STMN3Q9NZ72 180 aa13.21□□□□□ -0.29
SEC23A-201ENST00000307712 A0A1W2PQ67 120 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 CLDN9O95484 217 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 CYP2A7P20853 494 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 NR4A2P43354 598 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 CDH12P55289 794 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 RPS3AP61247 264 aaKnown RBP13.21□□□□□ -0.3
SEC23A-201ENST00000307712 RAPSNQ13702 412 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 CLCA4Q14CN2 919 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 USP39Q53GS9 565 aaKnown RBP13.21□□□□□ -0.3
SEC23A-201ENST00000307712 TMPRSS11AQ6ZMR5 421 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 RBFAQ8N0V3 343 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 OR13F1Q8NGS4 319 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 OR13J1Q8NGT2 312 aa13.21□□□□□ -0.3
SEC23A-201ENST00000307712 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.3
SEC23A-201ENST00000307712 CNPPD1Q9BV87 410 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms