RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KCNC2Q96PR1 638 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 TMEM185BQ9H7F4 350 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SLCO1B3Q9NPD5 702 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 FBP2O00757 339 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 LCKP06239 509 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SLC7A1P30825 629 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 KCNJ5P48544 419 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PSMA6P60900 246 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CRTC1Q6UUV9 634 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 ZSCAN4Q8NAM6 433 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 C14orf105Q9NVL8 296 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CAP2P40123 477 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 MAPK8P45983 427 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 GNG8Q9UK08 70 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PCDHGB7Q9Y5F8 929 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 CABIN1Q9Y6J0 2220 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 KERAO60938 352 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 TSPAN15O95858 294 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF557Q8N988 423 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 OR6K2Q8NGY2 324 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 VCPIP1Q96JH7 1222 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 KAT8Q9H7Z6 458 aaKnown RBP13.2□□□□□ -0.3
TRIM56-201ENST00000306085 SH2B3Q9UQQ2 575 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 COLEC10Q9Y6Z7 277 aa13.2□□□□□ -0.3
TRIM56-201ENST00000306085 PIK3CBP42338 1070 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 PLEKHA3Q9HB20 300 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF99A8MXY4 864 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CYP2C18P33260 490 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 MOGSQ13724 837 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 TM9SF2Q99805 663 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 F8VP50 259 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF35P13682 527 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF616Q08AN1 781 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 MFSD13AQ14CX5 517 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ACMSDQ8TDX5 336 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 TCEAL4Q96EI5 215 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 NRCAMQ92823 1304 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 LRRC72A6NJI9 287 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 EML1O00423 815 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ACOX3O15254 700 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ITGAVP06756 1048 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 BCKDHAP12694 445 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 LIMK2P53671 638 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 KLHL6Q8WZ60 621 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 SEC61A2Q9H9S3 476 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ARHGAP20Q9P2F6 1191 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CD36P16671 472 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 AQP4P55087 323 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 LY6KQ17RY6 165 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 GSTT2P0CG29 244 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CCNOP22674 350 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 NR0B1P51843 470 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CPNE2Q96FN4 548 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 PTPN18Q99952 460 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 WFS1O76024 890 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 JUNP05412 331 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 GNPDA1P46926 289 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 DPY19L4Q7Z388 723 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 LRTOMTQ8WZ04 291 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 PAPSS1O43252 624 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ENTPD6O75354 484 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ATP6V0D1P61421 351 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 MLIPQ5VWP3 458 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 FBXO33Q7Z6M2 555 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 SLC22A16Q86VW1 577 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 TRUB2O95900 331 aaKnown RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 GLDCP23378 1020 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-201ENST00000306085 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 HTATIP2Q9BUP3 242 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
TRIM56-201ENST00000306085 CASC3O15234 703 aaKnown RBP13.18□□□□□ -0.3
TRIM56-201ENST00000306085 PEX2P28328 305 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GNRHRP30968 328 aa13.18□□□□□ -0.3
TRIM56-201ENST00000306085 GNA12Q03113 381 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms