RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 MSH3P20585 1137 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 SLC6A2P23975 617 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ITGB7P26010 798 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 SLC6A12P48065 614 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 POLR2JP52435 117 aaKnown RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 IRX1P78414 480 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 HMGCS1Q01581 520 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 AP5B1Q2VPB7 878 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ZNF658BQ4V348 819 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 SFT2D3Q587I9 215 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 COQ5Q5HYK3 327 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ANO7Q6IWH7 933 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ERAP2Q6P179 960 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 NEK5Q6P3R8 708 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 TRIM46Q7Z4K8 759 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 GPR149Q86SP6 731 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 PCYOX1LQ8NBM8 494 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 PPFIBP2Q8ND30 876 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 TMIEQ8NEW7 156 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 PIP4K2CQ8TBX8 421 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 TSPEARQ8WU66 669 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 SKA2Q8WVK7 121 aaPredicted RBP6.4□□□□□ -1.39
USP47-201ENST00000305481 PYCR2Q96C36 320 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 AP2M1Q96CW1 435 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 DTD2Q96FN9 168 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 NKX2-4Q9H2Z4 354 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 SLC32A1Q9H598 525 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 CMTM6Q9NX76 183 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 GDE1Q9NZC3 331 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 FAM8A1Q9UBU6 413 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ZNHIT2Q9UHR6 403 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 PSMD13Q9UNM6 376 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 ANGPTL3Q9Y5C1 460 aa6.4□□□□□ -1.39
USP47-201ENST00000305481 MANBAO00462 879 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ANGPT2O15123 496 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PRNPP04156 253 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 HMOX2P30519 316 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TMEM115Q12893 351 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 NR6A1Q15406 480 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ZNF284Q2VY69 593 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PTCHD3Q3KNS1 767 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SYCE2Q6PIF2 218 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 XKR5Q6UX68 686 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 NRSN1Q8IZ57 195 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PQLC1Q8N2U9 271 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TERB1Q8NA31 727 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ASZ1Q8WWH4 475 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 USP7Q93009 1102 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SLCO4A1Q96BD0 722 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ECSITQ9BQ95 431 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PFDN4Q9NQP4 134 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ZIM2Q9NZV7 527 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 KLQ9UEF7 1012 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RIMS3Q9UJD0 308 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PCDHA9Q9Y5H5 950 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 KIAA1549LQ6ZVL6 1849 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 KIF26AQ9ULI4 1882 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 KCNE1BA0A087WTH5 132 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 EDDM13A0A1B0GTR0 161 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PRSS51A0A1B0GVH4 220 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 FAM234BA2RU67 622 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 EIF4E1BA6NMX2 242 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 CFAP99D6REC4 459 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 H0Y858 1186 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 EEDO75530 441 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 PREPP48147 710 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 KCNK10P57789 538 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 FCHO2Q0JRZ9 810 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TRAP1Q12931 704 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 GRM2Q14416 872 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ELAVL3Q14576 367 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 KIAA0040Q15053 153 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CCSMST1Q4G0I0 132 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SGO1Q5FBB7 561 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SAMD4BQ5PRF9 694 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CYP20A1Q6UW02 462 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RNF165Q6ZSG1 346 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 NEK10Q6ZWH5 1172 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TRIM74Q86UV6 250 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ZFAND4Q86XD8 727 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PDSS2Q86YH6 399 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 KIAA2013Q8IYS2 634 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RGL4Q8IZJ4 473 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CHCHD4Q8N4Q1 142 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 TIFAQ96CG3 184 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 MTFMTQ96DP5 389 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 HOPXQ9BPY8 73 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 RAD18Q9NS91 495 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 OBP2AQ9NY56 170 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ZNF490Q9ULM2 529 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 SLC22A14Q9Y267 594 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 POLR3HQ9Y535 204 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms