RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SLC38A4Q969I6 547 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CLPBQ9H078 707 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 MROH8Q9H579 483 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CCDC177Q9NQR7 707 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TREX1Q9NSU2 369 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 C1orf109Q9NX04 203 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ERVK13-1Q9NX77 482 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 RPS6KA6Q9UK32 745 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PCDHB14Q9Y5E9 798 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 FABP3P05413 133 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 IFNA8P32881 189 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 GNG2P59768 71 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CD83Q01151 205 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF45Q02386 682 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PLA2G4EQ3MJ16 856 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 UGT3A2Q3SY77 523 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 BRMS1LQ5PSV4 323 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 OR2T5Q6IEZ7 315 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 RTL3Q8N8U3 475 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 OR52B6Q8NGF0 335 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 OR2T29Q8NH02 315 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 DHRS1Q96LJ7 313 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 AMBRA1Q9C0C7 1298 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 VAPAQ9P0L0 249 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PER2O15055 1255 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 BNIP3LO60238 219 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 IFI30P13284 250 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 WARSP23381 471 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 LRRC74AQ0VAA2 488 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 SCAPQ12770 1279 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PYCR3Q53H96 274 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 FAM83FQ8NEG4 500 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 GRPEL2Q8TAA5 225 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 VMP1Q96GC9 406 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 SERPINB11Q96P15 392 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TSGA13Q96PP4 275 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 AARSD1Q9BTE6 412 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ZNF490Q9ULM2 529 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PTTG1O95997 202 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 DNTTP04053 509 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CASP3P42574 277 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 CLK3P49761 638 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 USP51Q70EK9 711 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 C19orf18Q8NEA5 215 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PHF10Q8WUB8 498 aaKnown RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 IPCEF1Q8WWN9 437 aaPredicted RBP12.8□□□□□ -0.36
TRIM35-201ENST00000305364 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PIK3R3Q92569 461 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TMCO6Q96DC7 493 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PANX1Q96RD7 426 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 KATNAL1Q9BW62 490 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TMEM161AQ9NX61 479 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 NME7Q9Y5B8 376 aa12.8□□□□□ -0.36
TRIM35-201ENST00000305364 STRCQ7RTU9 1775 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TLR5O60602 858 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TGM1P22735 817 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TGFBR1P36897 503 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 HNF4AP41235 474 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GRIK2Q13002 908 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PON2Q15165 354 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GNASQ5JWF2 1037 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 AFTPHQ6ULP2 937 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 VASH1Q7L8A9 365 aaPredicted RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PYURFQ96I23 114 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 KCNC2Q96PR1 638 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 LRTM1Q9HBL6 345 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PTCH2Q9Y6C5 1203 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 SH3BGRLO75368 114 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 EPN2O95208 641 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 PGRP06401 933 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 ABCB1P08183 1280 aaPredicted RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GADD45AP24522 165 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 CATSPEREQ5SY80 951 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 DOK6Q6PKX4 331 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 RBM23Q86U06 439 aaKnown RBP12.79□□□□□ -0.36
TRIM35-201ENST00000305364 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 GPC2Q8N158 579 aa12.79□□□□□ -0.36
TRIM35-201ENST00000305364 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms