RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PLPP4Q5VZY2 271 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 IQCHQ86VS3 1027 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SVOPLQ8N434 492 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 OR5J2Q8NH18 312 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 LPGAT1Q92604 370 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 LPPQ93052 612 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 GAS2L1Q99501 681 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 C14orf105Q9NVL8 296 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PLK2Q9NYY3 685 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PCYOX1Q9UHG3 505 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PDE10AQ9Y233 779 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PTCH2Q9Y6C5 1203 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SALL1Q9NSC2 1324 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PTPRAP18433 802 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 HK1P19367 917 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 RPIAP49247 311 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 OAZ1P54368 228 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ST3GAL4Q11206 333 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PAMR1Q6UXH9 720 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 NAXEQ8NCW5 288 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PROKR2Q8NFJ6 384 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 EPS8L1Q8TE68 723 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 P2RX7Q99572 595 aaKnown RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 EBPLQ9BY08 206 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SLC22A4Q9H015 551 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 AGO3Q9H9G7 860 aaKnown RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 B3GAT2Q9NPZ5 323 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 NUDT4Q9NZJ9 180 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ERVW-1Q9UQF0 538 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TCRBV9S1A1TA0A576 114 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ILVBLA1L0T0 632 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 MAGEB17A8MXT2 336 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 AXIN1O15169 862 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CLDN11O75508 207 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ALPPP05187 535 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 BPGMP07738 259 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SPATA31D3P0C874 917 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SLC2A2P11168 524 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 MRPS5P82675 430 aaKnown RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CACNG1Q06432 222 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SPATA31D4Q6ZUB0 917 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TREML1Q86YW5 311 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CREG2Q8IUH2 290 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TOMM5Q8N4H5 51 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 KLHL36Q8N4N3 616 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TMIEQ8NEW7 156 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CYP2W1Q8TAV3 490 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 HEPHQ9BQS7 1158 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 RRAGCQ9HB90 399 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ADAMTS13Q76LX8 1427 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 OR2AG2A6NM03 316 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 SMAD9O15198 467 aaKnown RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ITGA5P08648 1049 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ERVK-21P61565 698 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 FAPQ12884 760 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 FAM189A2Q15884 450 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 MAP1SQ66K74 1059 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 RHBDF2Q6PJF5 856 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 DCLRE1AQ6PJP8 1040 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CBR4Q8N4T8 237 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 ART4Q93070 314 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 POLR2J2Q9GZM3 115 aaKnown RBP10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PORCNQ9H237 461 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 KCNU1A8MYU2 1149 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM150CB9EJG8 249 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DNAJA2O60884 412 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 STBD1O95210 358 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PRNPP04156 253 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PEPDP12955 493 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 MATKP42679 507 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 MMP14P50281 582 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DSG2Q14126 1118 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RBM20Q5T481 1227 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CHST9Q7L1S5 443 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SAMD14Q8IZD0 417 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SMARCD2Q92925 531 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TBL1XR1Q9BZK7 514 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GLOD4Q9HC38 313 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TM9SF3Q9HD45 589 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 C1orf109Q9NX04 203 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TAS2R14Q9NYV8 317 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TBC1D14Q9P2M4 693 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 EVLQ9UI08 416 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 MYPNQ86TC9 1320 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 hCG_1818297A0A087WSY0 165 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PRORSD1PA6NEY8 169 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SSX5O60225 188 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CXCR1P25024 350 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 KLRK1P26718 216 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 HSPA7P48741 367 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SP2Q02086 613 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CNTN2Q02246 1040 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 REP15Q6BDI9 236 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 BBS12Q6ZW61 710 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 JAGN1Q8N5M9 183 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 COQ8AQ8NI60 647 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms