RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 AP3D1O14617 1153 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 SEC22BO75396 215 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 B3GAT3O94766 335 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 MLYCDO95822 493 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 HPRP00739 348 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 VIPP01282 170 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 FAM189BP81408 668 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 UBE2J2Q8N2K1 259 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 SVOPLQ8N434 492 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 C3orf58Q8NDZ4 430 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 SETD9Q8NE22 299 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 LILRB4Q8NHJ6 448 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 NUAK2Q9H093 628 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 FBXO8Q9NRD0 319 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 TMLHEQ9NVH6 421 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 TESMINQ9Y4I5 508 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 PTGESO14684 152 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CNMDO75829 334 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CBX2Q14781 532 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 SLC14A2Q15849 920 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 PPP2R2DQ66LE6 453 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 METTL4Q8N3J2 472 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 OR4F6Q8NGB9 312 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ACOT13Q9NPJ3 140 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 GIMAP4Q9NUV9 329 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 FGF10O15520 208 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 RPP40O75818 363 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ABCB1P08183 1280 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CCDC159P0C7I6 412 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CD6P30203 668 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 LIPAP38571 399 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 IDH2P48735 452 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 HSPA7P48741 367 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TAB1Q15750 504 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CARD16Q5EG05 197 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 PRSS36Q5K4E3 855 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 RAP1GAP2Q684P5 730 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 APOBEC3FQ8IUX4 373 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 LRRC49Q8IUZ0 686 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 C10orf111Q8N326 155 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 LIX1Q8N485 282 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF548Q8NEK5 533 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 EMILIN2Q9BXX0 1053 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 RERGLQ9H628 205 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 OPTCQ9UBM4 332 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TMEFF2Q9UIK5 374 aaPredicted RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ABCG2Q9UNQ0 655 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 SAMHD1Q9Y3Z3 626 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TTC3P53804 2025 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 GPR182O15218 404 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 SLC25A27O95847 323 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TBX18O95935 607 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CTSHP09668 335 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ACVRL1P37023 503 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 SCNN1GP51170 649 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 HK3P52790 923 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 FCGRTP55899 365 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 OR2B6P58173 313 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ACOX1Q15067 660 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 BHLHA9Q7RTU4 235 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 EFL1Q7Z2Z2 1120 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 PHF10Q8WUB8 498 aaKnown RBP14.39□□□□□ -0.11
COL6A2-201ENST00000300527 YIPF6Q96EC8 236 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 TPD52L3Q96J77 140 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 BTN2A3PQ96KV6 586 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 ACTL8Q9H568 366 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 CPNE5Q9HCH3 593 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 SLC6A13Q9NSD5 602 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 EHD3Q9NZN3 535 aa14.39□□□□□ -0.11
COL6A2-201ENST00000300527 M0R129 80 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 POMCP01189 267 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 RPS17P08708 135 aaKnown RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 AQP1P29972 269 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 KRT20P35900 424 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 CLK3P49761 638 aaKnown RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 STC1P52823 247 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 EFEMP1Q12805 493 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 SNAP47Q5SQN1 464 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 VTCN1Q7Z7D3 282 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 CDKN2AIPNLQ96HQ2 116 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 RPRD1AQ96P16 312 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 APOL4Q9BPW4 351 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 BRINP2Q9C0B6 783 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 KRT84Q9NSB2 600 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 GPSM3Q9Y4H4 160 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 GABRDO14764 452 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PER2O15055 1255 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 MGEA5O60502 916 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 VPS26AO75436 327 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 ARPC4P59998 168 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PPTC7Q8NI37 304 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 TSPEARQ8WU66 669 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 REXO5Q96IC2 774 aaKnown RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 TXNDC15Q96J42 360 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms