RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ERAL1O75616 437 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 SLC13A2Q13183 592 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 DDI2Q5TDH0 399 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 ZBTB2Q8N680 514 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 STON2Q8WXE9 905 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 KIAA1191Q96A73 305 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 CFAP97Q9P2B7 532 aa13.06□□□□□ -0.32
CASC4-201ENST00000299957 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
CASC4-201ENST00000299957 CLDN9O95484 217 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 CD36P16671 472 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TNFRSF1BP20333 461 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 LRP8Q14114 963 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TMEM203Q969S6 136 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TP53INP1Q96A56 240 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TEX37Q96LM6 180 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 YME1L1Q96TA2 773 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 WRAP53Q9BUR4 548 aaKnown RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 ATP13A3Q9H7F0 1226 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ZNF696Q9H7X3 374 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TEKT2Q9UIF3 430 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 BTBD3Q9Y2F9 522 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 LYVE1Q9Y5Y7 322 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TRIP11Q15643 1979 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 A0A0U1RQF3 1178 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 A8MU76 341 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 INMTO95050 263 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 CHRNA1P02708 482 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 IFNA8P32881 189 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 RGRP47804 291 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 NFKB2Q00653 900 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ZBTB6Q15916 424 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PHKG1Q16816 387 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PPP4R4Q6NUP7 873 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 RNF175Q8N4F7 328 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 BEND7Q8N7W2 519 aaPredicted RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 OR13J1Q8NGT2 312 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.32
CASC4-201ENST00000299957 CLEC4AQ9UMR7 237 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 DYRK1BQ9Y463 629 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 CPQQ9Y646 472 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 AIREO43918 545 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 USP39Q53GS9 565 aaKnown RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 ZNF648Q5T619 568 aaPredicted RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 VTCN1Q7Z7D3 282 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SLC15A4Q8N697 577 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 AMER2Q8N7J2 671 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 LMNTD1Q8N9Z9 388 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 KLHDC9Q8NEP7 349 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PHF21AQ96BD5 680 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SYT17Q9BSW7 474 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ARHGAP39Q9C0H5 1083 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SACM1LQ9NTJ5 587 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 C1orf109Q9NX04 203 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 FLRT1Q9NZU1 646 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ADAMTSL1Q8N6G6 1762 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TRIM24O15164 1050 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 GSRP00390 522 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ANXA4P09525 319 aaPredicted RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 RFC2P35250 354 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 CSKP41240 450 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PRKCZQ05513 592 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SERINC3Q13530 473 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ZNF846Q147U1 533 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 HKDC1Q2TB90 917 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 FAM91A1Q658Y4 838 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 ANKRD34AQ69YU3 496 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 TMCO2Q7Z6W1 182 aaPredicted RBP13.05□□□□□ -0.32
CASC4-201ENST00000299957 DTWD1Q8N5C7 304 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 PROX1Q92786 737 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
CASC4-201ENST00000299957 SCN1AP35498 2009 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 LOC100130705A0A1B0GUX0 176 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 NEDD8-MDP1E9PL57 170 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 M0R129 80 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SLC28A1O00337 649 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 ZNF195O14628 629 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SLC22A2O15244 555 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 APOL3O95236 402 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 IL6P05231 212 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 ZNF26P17031 533 aaPredicted RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 ERVPABLB-1P60509 514 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.329e-21■■■■■ 84.4
CASC4-201ENST00000299957 RNASE12Q5GAN4 147 aaKnown RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 INTS11Q5TA45 600 aaKnown RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 OTUB1Q96FW1 271 aaPredicted RBP13.04□□□□□ -0.32
CASC4-201ENST00000299957 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 PTPN18Q99952 460 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
CASC4-201ENST00000299957 DNAJB9Q9UBS3 223 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms