RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 RASAL1O95294 804 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 EOMESO95936 686 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 GSNP06396 782 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 FCGR1AP12314 374 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 CCNA2P20248 432 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 MYF6P23409 242 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 SEPHS1P49903 392 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 FAAH2Q6GMR7 532 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 HID1Q8IV36 788 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 PEX5LQ8IYB4 626 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 WBP2Q969T9 261 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 ULK4Q96C45 1275 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 ZFYVE19Q96K21 471 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 CLPBQ9H078 707 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 TRIT1Q9H3H1 467 aaKnown RBP13.21□□□□□ -0.3
CTDP1-202ENST00000299543 SMURF2Q9HAU4 748 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 EXD2Q9NVH0 621 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 HRH2P25021 359 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ANKRD34AQ69YU3 496 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 DTWD1Q8N5C7 304 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 TMBIM1Q969X1 311 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 DUS3LQ96G46 650 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 WWOXQ9NZC7 414 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GOLGA4Q13439 2230 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 MYO16Q9Y6X6 1858 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 TBKBP1A7MCY6 615 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PTGES3LE9PB15 166 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 CCRL2O00421 344 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 BMP10O95393 424 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 TSPAN12O95859 305 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 DLGAP3O95886 979 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ATF6P18850 670 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PRKACGP22612 351 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 MTHFRP42898 656 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 CDH4P55283 916 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 COPZ1P61923 177 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GTF2H2Q13888 395 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ARHGEF7Q14155 803 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 FAM174BQ3ZCQ3 159 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 CYBRD1Q53TN4 286 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GTF2H2CQ6P1K8 395 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 TXNDC11Q6PKC3 985 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 MBOAT1Q6ZNC8 495 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GCNT7Q6ZNI0 430 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GOLGA7Q7Z5G4 137 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SDCCAG3Q96C92 435 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ASB8Q9H765 288 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 FBXO9Q9UK97 447 aaPredicted RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 DOCK4Q8N1I0 1966 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 OR6C75A6NL08 312 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SYN3O14994 580 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 COCHO43405 550 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 XYLBO75191 536 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SEC22BO75396 215 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 EEDO75530 441 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 SERPINB1P30740 379 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 MAGEA11P43364 429 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ACLYP53396 1101 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 TUBA4AP68366 448 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GPR17Q13304 367 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PLD1Q13393 1074 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 HECTD3Q5T447 861 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 EFL1Q7Z2Z2 1120 aaKnown RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PHACTR4Q8IZ21 702 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 ANKK1Q8NFD2 765 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
CTDP1-202ENST00000299543 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
CTDP1-202ENST00000299543 PRMT5O14744 637 aaPredicted RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 KDELR3O43731 214 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 TBL1XO60907 577 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 IL7RP16871 459 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 CPSF6Q16630 551 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ANKRD46Q86W74 232 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 FAM162AQ96A26 154 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 MAGED4Q96JG8 741 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ZBTB18Q99592 522 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 UTS2RQ9UKP6 389 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 STX16O14662 325 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 FFAR2O15552 330 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms