RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 TNK2Q07912 1038 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ELAVL3Q14576 367 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 ZNF460Q14592 562 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 LIPMQ5VYY2 423 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 DPY19L3Q6ZPD9 716 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 HPS6Q86YV9 775 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ZDHHC13Q8IUH4 622 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 TSEN15Q8WW01 171 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SMPDL3AQ92484 453 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MS4A4AQ96JQ5 239 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SEC61A2Q9H9S3 476 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 KCNK13Q9HB14 408 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 CTPS2Q9NRF8 586 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PCDHGA6Q9Y5G7 932 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PRODHO43272 600 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 LATO43561 262 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MPIP34949 423 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 NAA20P61599 178 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SEMA3AQ14563 771 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SLC9A4Q6AI14 798 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SULT1C3Q6IMI6 304 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ATG14Q6ZNE5 492 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MON1BQ7L1V2 547 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PIWIL4Q7Z3Z4 852 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 CUZD1Q86UP6 607 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ANKRD46Q86W74 232 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 TMEM25Q86YD3 366 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 HDAC7Q8WUI4 952 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SH3YL1Q96HL8 342 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 TWNKQ96RR1 684 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SMOC2Q9H3U7 446 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 UBE2ZQ9H832 354 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SLC35C2Q9NQQ7 365 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MRPS7Q9Y2R9 242 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SH3GLB1Q9Y371 365 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 CCDC162PA2VCL2 907 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 FAM86C2PA6NEL3 165 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 NIPSNAP2O75323 286 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 CD247P20963 164 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 OR4D2P58180 307 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 DEFA1P59665 94 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 DEFA3P59666 94 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 HHEXQ03014 270 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 FOXC1Q12948 553 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ECH1Q13011 328 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ABHD17BQ5VST6 288 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PAPD7Q5XG87 772 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 RANBP3LQ86VV4 465 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SAMD14Q8IZD0 417 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 XRN1Q8IZH2 1706 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 SFRP1Q8N474 314 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MBOAT7Q96N66 472 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 TLR10Q9BXR5 811 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 FAM124BQ9H5Z6 455 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 MRPL39Q9NYK5 338 aaKnown RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 NKIRAS2Q9NYR9 191 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PACSIN3Q9UKS6 424 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 CFL2Q9Y281 166 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 MAP2K7O14733 419 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ECDO95905 644 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 EPHA3P29320 983 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ZNF267Q14586 743 aaPredicted RBP6.99□□□□□ -1.29
RAG1-201ENST00000299440 FAM182AQ5T1J6 154 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 PLEKHA7Q6IQ23 1121 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ZCCHC12Q6PEW1 402 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 NUDT13Q86X67 352 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 C10orf107Q8IVU9 208 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 OR8H2Q8N162 312 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 SCAMP4Q969E2 229 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 OLFM3Q96PB7 478 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 ST6GALNAC4Q9H4F1 302 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 BRD7Q9NPI1 651 aa6.99□□□□□ -1.29
RAG1-201ENST00000299440 POLR1CO15160 346 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 KDELR3O43731 214 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 STX11O75558 287 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 C5AR1P21730 350 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 ENPP2Q13822 863 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 SQLEQ14534 574 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 PRKD1Q15139 912 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 CLLU1OSQ5K130 101 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 GCNT6Q5T4J0 391 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 FAM69BQ5VUD6 431 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 METTL21CQ5VZV1 264 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 ZNF57Q68EA5 555 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 TNFAIP8L2Q6P589 184 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 SMARCD3Q6STE5 483 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 ADHFE1Q8IWW8 467 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 CLEC1AQ8NC01 280 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 SNIP1Q8TAD8 396 aaKnown RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 DLG3Q92796 817 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 OXNAD1Q96HP4 312 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 LENG8Q96PV6 779 aaPredicted RBP6.98□□□□□ -1.29
RAG1-201ENST00000299440 PDLIM7Q9NR12 457 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 GDE1Q9NZC3 331 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 MARK1Q9P0L2 795 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 SLCO3A1Q9UIG8 710 aa6.98□□□□□ -1.29
RAG1-201ENST00000299440 AP3M1Q9Y2T2 418 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms