RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PCCBP05166 539 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 SNRPB2P08579 225 aaKnown RBP25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 EPB42P16452 691 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 ACTR3P61158 418 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 ART3Q13508 389 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 CAMK2GQ13555 558 aaPredicted RBP25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 DOK6Q6PKX4 331 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 FBXW8Q8N3Y1 598 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 HDDC3Q8N4P3 179 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 TMEM159Q96B96 161 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 SLC39A3Q9BRY0 314 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 KLQ9UEF7 1012 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 CKAP5Q14008 2032 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 WDR47O94967 919 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 PCDH8O95206 1070 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 PSMG1O95456 288 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 EGFP01133 1207 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 HIST1H2AGP0C0S8 130 aaPredicted RBP25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 HIST1H2ADP20671 130 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 CAPN3P20807 821 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 MTHFRP42898 656 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 THOP1P52888 689 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 MTTPP55157 894 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 STX1BP61266 288 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 YBX1P67809 324 aaKnown RBP25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 VPS26BQ4G0F5 336 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 RASGRP3Q8IV61 690 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 CFAP206Q8IYR0 622 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 HIST1H2AHQ96KK5 128 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 HIST1H2AJQ99878 128 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 H2AFJQ9BTM1 129 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 POMPQ9Y244 141 aa25.04■■□□□ 1.6
SDCCAG3-201ENST00000298537 CHUKO15111 745 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 HMOX2P30519 316 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 SESN3P58005 492 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 HMGCS1Q01581 520 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 DPTQ07507 201 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 CEACAM7Q14002 265 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 LRP8Q14114 963 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 TMEM196Q5HYL7 178 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 CHRDL2Q6WN34 429 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 FAM156AQ8NDB6 213 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 SLC32A1Q9H598 525 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 MBNL1Q9NR56 388 aaKnown RBP25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 SDR39U1Q9NRG7 319 aaPredicted RBP25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 HEBP1Q9NRV9 189 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 KPNA5O15131 536 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 IGFBP4P22692 258 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 SLC6A12P48065 614 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 ATP4BP51164 291 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 PON2Q15165 354 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 CPSF6Q16630 551 aaKnown RBP eCLIP25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 MMEL1Q495T6 779 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 ZNF765Q7L2R6 523 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 MIER2Q8N344 545 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 FNDC5Q8NAU1 212 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 PPFIBP2Q8ND30 876 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 CSGALNACT1Q8TDX6 532 aa25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 TACO1Q9BSH4 297 aaKnown RBP25.03■■□□□ 1.6
SDCCAG3-201ENST00000298537 RNASEH2AO75792 299 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 COL9A1P20849 921 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 CTHP32929 405 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 BMP8BP34820 402 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 GGT5P36269 586 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ZFP36L2P47974 494 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ATXN3P54252 364 aaPredicted RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 UFM1P61960 85 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 FGL2Q14314 439 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 WSCD2Q2TBF2 565 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 HABP4Q5JVS0 413 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 FAM46CQ5VWP2 391 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 OGFOD2Q6N063 350 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ENDOVQ8N8Q3 282 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 AIG1Q9NVV5 245 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 CCL27Q9Y4X3 112 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 PCDHGA7Q9Y5G6 932 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ANHXE9PGG2 379 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 LSM1O15116 133 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ADAM23O75077 832 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 ENO2P09104 434 aaPredicted RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 GSTM1P09488 218 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 CYP2A7P20853 494 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 GSTM4Q03013 218 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 CCNIQ14094 377 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 TRMT5Q32P41 509 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 RFTN2Q52LD8 501 aaPredicted RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 C16orf89Q6UX73 402 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 PGAM4Q8N0Y7 254 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 MCOLN3Q8TDD5 553 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 NTMT1Q9BV86 223 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 MRPL1Q9BYD6 325 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 TRIM54Q9BYV2 358 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 GMPR2Q9P2T1 348 aaKnown RBP25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 EPS15L1Q9UBC2 864 aa25.02■■□□□ 1.6
SDCCAG3-201ENST00000298537 SYNCRIPO60506 623 aaKnown RBP25.01■■□□□ 1.59
SDCCAG3-201ENST00000298537 PSIP1O75475 530 aaKnown RBP25.01■■□□□ 1.59
SDCCAG3-201ENST00000298537 PFN3P60673 137 aa25.01■■□□□ 1.59
SDCCAG3-201ENST00000298537 CDKL1Q00532 357 aa25.01■■□□□ 1.59
SDCCAG3-201ENST00000298537 NR6A1Q15406 480 aa25.01■■□□□ 1.59
SDCCAG3-201ENST00000298537 HEATR4Q86WZ0 1026 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms