RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DBF4BQ8NFT6 615 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 NETO1Q8TDF5 533 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 OR52E6Q96RD3 313 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 FAIMQ9NVQ4 179 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 ARNTLO00327 626 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 TOR1BO14657 336 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 RAD51BO15315 384 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 TBL1XO60907 577 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 TULP3O75386 442 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 MRPL19P49406 292 aaKnown RBP23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CACNG1Q06432 222 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 C5orf22Q49AR2 442 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 FAM26DQ5JW98 314 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 HECTD3Q5T447 861 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 BTLAQ7Z6A9 289 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 NECAB2Q7Z6G3 386 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 ADAMTSL2Q86TH1 951 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 SNX29P2Q8IUI4 249 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CHDHQ8NE62 594 aaPredicted RBP23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CNIH3Q8TBE1 160 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 SPATA17Q96L03 361 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 CCDC138Q96M89 665 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 INPP5KQ9BT40 448 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.91■■□□□ 1.426e-15■□□□□ 9.8
SPTSSA-201ENST00000298130 LHX3Q9UBR4 397 aa23.91■■□□□ 1.42
SPTSSA-201ENST00000298130 DIRAS1O95057 198 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 PRSS23O95084 383 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 CPNE6O95741 557 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 ACLYP53396 1101 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 LSM3P62310 102 aaKnown RBP23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 DPY19L1Q2PZI1 675 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 LAIR2Q6ISS4 152 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 DET1Q7L5Y6 550 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 RNF175Q8N4F7 328 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 ZBTB18Q99592 522 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 MYOCQ99972 504 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 OPTCQ9UBM4 332 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 PRRC2BQ5JSZ5 2229 aaKnown RBP23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 A0A1B0GVM2 712 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 ELOVL7A1L3X0 281 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 ULK1O75385 1050 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 INMTO95050 263 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 BCL10O95999 233 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 JAK1P23458 1154 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 AKT1P31749 480 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 VAC14Q08AM6 782 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 PLD1Q13393 1074 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 AQP6Q13520 282 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 SPCS2Q15005 226 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 ARMC12Q5T9G4 340 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 FBXO22Q8NEZ5 403 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 TSSK3Q96PN8 268 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 EIF3LQ9Y262 564 aaKnown RBP23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 PCDHB14Q9Y5E9 798 aa23.9■■□□□ 1.42
SPTSSA-201ENST00000298130 SERPINA1P01009 418 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 INHBBP09529 407 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 ALDH4A1P30038 563 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 KPNA1P52294 538 aaPredicted RBP23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 FAM189BP81408 668 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 PON2Q15165 354 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 ZNF829Q3KNS6 432 aaPredicted RBP23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 BEGAINQ9BUH8 593 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 C8orf4Q9NR00 106 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 DLGAP4Q9Y2H0 992 aa23.89■■□□□ 1.42
SPTSSA-201ENST00000298130 GAPDHSO14556 408 aaPredicted RBP23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 ABCB7O75027 752 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 SEC14L2O76054 403 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 TTKP33981 857 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 C6orf141Q5SZD1 244 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 ULK4Q96C45 1275 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 SLC22A12Q96S37 553 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 OSBPL10Q9BXB5 764 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 UGT2B28Q9BY64 529 aa23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 PAK1IP1Q9NWT1 392 aaPredicted RBP23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 TNPO3Q9Y5L0 923 aaKnown RBP23.89■■□□□ 1.41
SPTSSA-201ENST00000298130 SEC24AO95486 1093 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 ITGADQ13349 1161 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 BORCS5Q969J3 196 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 PYCR2Q96C36 320 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 PPP3R2Q96LZ3 170 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 LRTM1Q9HBL6 345 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 VNN3Q9NY84 501 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 PDE10AQ9Y233 779 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 PCDHB7Q9Y5E2 793 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 K7EPI3 171 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 NBNO60934 754 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 NPPAP01160 153 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 TACR1P25103 407 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 ADGRF1Q5T601 910 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 FAM43BQ6ZT52 329 aaPredicted RBP23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 ZNF555Q8NEP9 628 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 OR8J3Q8NGG0 315 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 RHBDF1Q96CC6 855 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 CASD1Q96PB1 797 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 RHNO1Q9BSD3 238 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 FUNDC2Q9BWH2 189 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 FAM126AQ9BYI3 521 aaPredicted RBP23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 TNKS2Q9H2K2 1166 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 IL26Q9NPH9 171 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 DNAJB9Q9UBS3 223 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms