RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 IPCEF1Q8WWN9 437 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 RNF31Q96EP0 1072 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 PTPN18Q99952 460 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 GPATCH1Q9BRR8 931 aaKnown RBP16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 ZNF282Q9UDV7 671 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 PRODHO43272 600 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 GRIA1P42261 906 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 HSF2Q03933 536 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 ATXN7L2Q5T6C5 722 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 SCAMP5Q8TAC9 235 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 TSEN15Q8WW01 171 aaKnown RBP16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 HAVCR1Q96D42 359 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 MED28Q9H204 178 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 KCNN2Q9H2S1 579 aa16.52■□□□□ 0.24
CNTNAP3-201ENST00000297668 KLHL33A6NCF5 533 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 UBXN11Q5T124 520 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 GPR153Q6NV75 609 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 CYP2U1Q7Z449 544 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 RANBP3LQ86VV4 465 aaPredicted RBP16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 NPAS4Q8IUM7 802 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 CD320Q9NPF0 282 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 SNX7Q9UNH6 387 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 ARL5AQ9Y689 179 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 TCRBV7S3A2A0A539 114 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 MATN2O00339 956 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 PI15O43692 258 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 E2F2Q14209 437 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 ZNF311Q5JNZ3 666 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 CCDC36Q8IYA8 594 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 TP53INP1Q96A56 240 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 LMLNQ96KR4 655 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 MTERF1Q99551 399 aaKnown RBP16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 WRAP73Q9P2S5 460 aaPredicted RBP16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLIT3O75094 1523 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 RPLP0P05388 317 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 CKMT2P17540 419 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 MERTKQ12866 999 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 ILF3Q12906 894 aaKnown RBP eCLIP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 DCAF12L1Q5VU92 463 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 PAQR3Q6TCH7 311 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 OR13C4Q8NGS5 318 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 LCN9Q8WX39 176 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 FCGR1BQ92637 280 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 ZNF347Q96SE7 839 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 CCDC59Q9P031 241 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 PGLSO95336 258 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 RFTN1Q14699 578 aaPredicted RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 RBM18Q96H35 190 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 CITED4Q96RK1 184 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 LPIN3Q9BQK8 851 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 CNPPD1Q9BV87 410 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 PRKAB1Q9Y478 270 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 RSL1D1O76021 490 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 ZNF12P17014 697 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 SCNN1AP37088 669 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLC18A1P54219 525 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 NRLP54845 237 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 EEFSECP57772 596 aaKnown RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 CLEC20AQ6ZU45 233 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 EBF2Q9HAK2 575 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 PIGKQ92643 395 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLC35G5Q96KT7 338 aa16.51■□□□□ 0.23
CNTNAP3-201ENST00000297668 OR51F1A6NGY5 319 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 PIGRP01833 764 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ITGA3P26006 1051 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TIE1P35590 1138 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 AP3S2P59780 193 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 DAG1Q14118 895 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TUBA3EQ6PEY2 450 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 GET4Q7L5D6 327 aaPredicted RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TNFAIP8L1Q8WVP5 186 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ASB9Q96DX5 294 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ZBED6CLQ96FA7 236 aaPredicted RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 PCBD2Q9H0N5 130 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TVP23BQ9NYZ1 205 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 EOMESO95936 686 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 MTHFD1P11586 935 aaKnown RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 MYCLP1P12525 358 aaPredicted RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ANXA8P13928 327 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ARHGDIBP52566 201 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 PLA2G16P53816 162 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 STXBP1P61764 594 aaKnown RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 CAP1Q01518 475 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TXNRD3NBQ6F5E7 133 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 SLC22A17Q8WUG5 538 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 TRIM2Q9C040 744 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 RBMX2Q9Y388 322 aaKnown RBP16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 ITM2AO43736 263 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 RASGRP1O95267 797 aa16.5■□□□□ 0.23
CNTNAP3-201ENST00000297668 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms