RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 LRRC40Q9H9A6 602 aa19.01■□□□□ 0.63
CXCL3-201ENST00000296026 ACTR10Q9NZ32 417 aa19.01■□□□□ 0.63
CXCL3-201ENST00000296026 GRID2IPA4D2P6 1211 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 GOLGA6L9A6NEM1 432 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 TMEM63AO94886 807 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 GSTM1P09488 218 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 GP1BBP13224 206 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 ITGA1P56199 1179 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 GSTM4Q03013 218 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 DBN1Q16643 649 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 PAPD7Q5XG87 772 aaKnown RBP19■□□□□ 0.63
CXCL3-201ENST00000296026 RAD9BQ6WBX8 426 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 CDHR3Q6ZTQ4 885 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 EFCAB3Q8N7B9 438 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 TTC13Q8NBP0 860 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 ACRBPQ8NEB7 543 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 STYXQ8WUJ0 223 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 PIH1D1Q9NWS0 290 aaKnown RBP19■□□□□ 0.63
CXCL3-201ENST00000296026 SMARCAL1Q9NZC9 954 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 AMFRQ9UKV5 643 aa19■□□□□ 0.63
CXCL3-201ENST00000296026 CCDC78A2IDD5 438 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 E7EQ34 232 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 ZNF749O43361 778 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 VPS4BO75351 444 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 AP2A2O94973 939 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 VAV2P52735 878 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 CPT1CQ8TCG5 803 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 ALS2CR12Q96Q35 445 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 VPS4AQ9UN37 437 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 ICKQ9UPZ9 632 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 PRSS21Q9Y6M0 314 aa18.99■□□□□ 0.63
CXCL3-201ENST00000296026 SPTBP11277 2137 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 NAV2Q8IVL1 2488 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 LIN7AO14910 233 aaPredicted RBP18.98■□□□□ 0.63
CXCL3-201ENST00000296026 CEACAM4O75871 244 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 HBQ1P09105 142 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 NSG1P42857 185 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 UQCRFS1P47985 274 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 ZNF75DP51815 510 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 GDF10P55107 478 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 BRD3Q15059 726 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 NCF4Q15080 339 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 P3H1Q32P28 736 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 SPESP1Q6UW49 350 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 PEX26Q7Z412 305 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 HOOK3Q86VS8 718 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 TAB3Q8N5C8 712 aaPredicted RBP18.98■□□□□ 0.63
CXCL3-201ENST00000296026 OR5AR1Q8NGP9 310 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 DPH2Q9BQC3 489 aaPredicted RBP18.98■□□□□ 0.63
CXCL3-201ENST00000296026 FAM60AQ9NP50 221 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 PACSIN2Q9UNF0 486 aaPredicted RBP18.98■□□□□ 0.63
CXCL3-201ENST00000296026 ASF1AQ9Y294 204 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 ZNF451Q9Y4E5 1061 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 PCDHGB7Q9Y5F8 929 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 MED13Q9UHV7 2174 aa18.98■□□□□ 0.63
CXCL3-201ENST00000296026 BLACEA4D250 179 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 C9J4A7 227 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 QSOX1O00391 747 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 ZNF185O15231 689 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 PSMD3O43242 534 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 AP2A1O95782 977 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 AGXTP21549 392 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 MSNP26038 577 aaKnown RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 SHMT2P34897 504 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 KLF1Q13351 362 aaPredicted RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 ZNF385CQ66K41 422 aaPredicted RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 UNC5AQ6ZN44 842 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 MED25Q71SY5 747 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 KIAA1328Q86T90 577 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 TRIM73Q86UV7 250 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 GPR135Q8IZ08 494 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 ZBTB2Q8N680 514 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 UBL4BQ8N7F7 174 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 C19orf47Q8N9M1 422 aaKnown RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 TMEM102Q8N9M5 508 aaPredicted RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 GALNT11Q8NCW6 608 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 FDCSPQ8NFU4 85 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 SLC35B2Q8TB61 432 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 ELMO1Q92556 727 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 N4BP2L2Q92802 583 aaPredicted RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 MRFAP1L1Q96HT8 127 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 PSMG3-AS1Q96PY0 264 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 TMEM121Q9BTD3 319 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 G3BP2Q9UN86 482 aaKnown RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 R3HDM2Q9Y2K5 976 aaKnown RBP18.97■□□□□ 0.63
CXCL3-201ENST00000296026 PIKFYVEQ9Y2I7 2098 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 RELNP78509 3460 aa18.97■□□□□ 0.63
CXCL3-201ENST00000296026 MROH6A6NGR9 719 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 OR51F1A6NGY5 319 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 A6NL46 340 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 MIF4GDA9UHW6 222 aaKnown RBP18.96■□□□□ 0.63
CXCL3-201ENST00000296026 SORBS2O94875 1100 aaKnown RBP18.96■□□□□ 0.63
CXCL3-201ENST00000296026 FTH1P02794 183 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 UGT2B7P16662 529 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 GNLYP22749 145 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 ACADLP28330 430 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 ITIH4Q14624 930 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 NAPRTQ6XQN6 538 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 LINC00523Q86TU6 105 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms