RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 GRIK2Q13002 908 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PTPRNQ16849 979 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 XKR7Q5GH72 579 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 SPANXN4Q5MJ08 99 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 SPANXN2Q5MJ10 180 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 LETMD1Q6P1Q0 360 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 LINC00299Q6ZSB3 139 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 NEK10Q6ZWH5 1172 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ANKRD46Q86W74 232 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 NLGN4XQ8N0W4 816 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 AADATQ8N5Z0 425 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 TOP6BLQ8N6T0 577 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 OR7G1Q8NGA0 311 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RHEBL1Q8TAI7 183 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 HMCESQ96FZ2 354 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 Q96MT0 163 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 KCNS3Q9BQ31 491 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 DPY30Q9C005 99 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ERVK13-1Q9NX77 482 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RNF6Q9Y252 685 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RLFQ13129 1914 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 METTL15A6NJ78 407 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 GABRDO14764 452 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RGS5O15539 181 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 RPS17P08708 135 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 KRT20P35900 424 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 HUNKP57058 714 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 CCDC58Q4VC31 144 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 AGAP6Q5VW22 663 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ZCCHC8Q6NZY4 707 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 TRAF7Q6Q0C0 670 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 CEP68Q76N32 757 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 HORMAD1Q86X24 394 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 DPP10Q8N608 796 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 LINC01465Q8N7H1 131 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 SIDT2Q8NBJ9 832 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 FUBP1Q96AE4 644 aaKnown RBP10.08□□□□□ -0.8
LMX1A-201ENST00000294816 AGAP4Q96P64 663 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ITPAQ9BY32 194 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 ABCG8Q9H221 673 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 DUSP21Q9H596 190 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 PLSCR3Q9NRY6 295 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 BTBD3Q9Y2F9 522 aa10.08□□□□□ -0.8
LMX1A-201ENST00000294816 E9PAM4 449 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 LDB2O43679 373 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 SCELO95171 688 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 FKBP9O95302 570 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 WISP3O95389 354 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 NPPAP01160 153 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 HAPLN1P10915 354 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 AZGP1P25311 298 aaKnown RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 CTSKP43235 329 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 NUDT6P53370 316 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 ZNF33AQ06730 810 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 E2F2Q14209 437 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 CARD16Q5EG05 197 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 KRTCAP2Q8N6L1 136 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 PSMG2Q969U7 264 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 RHBDF1Q96CC6 855 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 PGAP3Q96FM1 320 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 IMP4Q96G21 291 aaKnown RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 SEMA3CQ99985 751 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 BEX2Q9BXY8 128 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 GORASP2Q9H8Y8 452 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TXNRD2Q9NNW7 524 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 KRT84Q9NSB2 600 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 PAQR5Q9NXK6 330 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 A0A096LPI6 279 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 SLC16A6O15403 523 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 FGF10O15520 208 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 NIPSNAP2O75323 286 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 C21orf33P30042 268 aaPredicted RBP10.07□□□□□ -0.8
LMX1A-201ENST00000294816 HMGCS1Q01581 520 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 IL18R1Q13478 541 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TP53BP2Q13625 1128 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 DDR2Q16832 855 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TIGD6Q17RP2 521 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TRIM60Q495X7 471 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 ZNF544Q6NX49 715 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 DPP9Q86TI2 863 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 OR8J3Q8NGG0 315 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 LINGO1Q96FE5 620 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 OR52E6Q96RD3 313 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 COPS4Q9BT78 406 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 PRRG3Q9BZD7 231 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 ACTL8Q9H568 366 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TRPV5Q9NQA5 729 aa10.07□□□□□ -0.8
LMX1A-201ENST00000294816 TRMT6Q9UJA5 497 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms