RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 NLRP8Q86W28 1048 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 MMAAQ8IVH4 418 aaKnown RBP16.47■□□□□ 0.23
CPSF4-201ENST00000292476 ARRDC3Q96B67 414 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 VPS35Q96QK1 796 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 NUSAP1Q9BXS6 441 aaKnown RBP16.47■□□□□ 0.23
CPSF4-201ENST00000292476 ZNF696Q9H7X3 374 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 LATS2Q9NRM7 1088 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 TMEM45AQ9NWC5 275 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 CA14Q9ULX7 337 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 PADI4Q9UM07 663 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 MED16Q9Y2X0 877 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 SCN8AQ9UQD0 1980 aa16.47■□□□□ 0.23
CPSF4-201ENST00000292476 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 EIF3FO00303 357 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 NIPSNAP2O75323 286 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TNFAIP8O95379 198 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 DGKAP23743 735 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SOX9P48436 509 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SH3BP2P78314 561 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SFSWAPQ12872 951 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 LCP2Q13094 533 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 OR4D1Q15615 310 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 POM121L1PQ3SYA9 428 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CLEC6AQ6EIG7 209 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 OGFOD2Q6N063 350 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TXNDC11Q6PKC3 985 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 Q6ZVL8 140 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CD200R1Q8TD46 325 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ZUFSPQ96AP4 578 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 PFDN4Q9NQP4 134 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ABCD2Q9UBJ2 740 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 DNAJC15Q9Y5T4 150 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 AP4B1Q9Y6B7 739 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 PIAS3Q9Y6X2 628 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TSPAN6O43657 245 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 KLK8O60259 260 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CBSLP0DN79 551 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CBSP35520 551 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ETV3P41162 512 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CLCN7P51798 805 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 MRPS21P82921 87 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CST6Q15828 149 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 FBXO43Q4G163 708 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SETMARQ53H47 684 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TMEM196Q5HYL7 178 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 IER5LQ5T953 404 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ZNF776Q68DI1 518 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CWF19L1Q69YN2 538 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 PAOXQ6QHF9 649 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SPATA19Q7Z5L4 167 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SIX5Q8N196 739 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 MIER2Q8N344 545 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 RNF148Q8N7C7 305 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CXorf40AQ8TE69 158 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TWIST2Q8WVJ9 160 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 AP2M1Q96CW1 435 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 DTD2Q96FN9 168 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 COQ10AQ96MF6 247 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ACOX2Q99424 681 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 CCT7Q99832 543 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 GABRG3Q99928 467 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 GPATCH1Q9BRR8 931 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 MRPS26Q9BYN8 205 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 TRIM15Q9C019 465 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 MUC13Q9H3R2 512 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 AKTIPQ9H8T0 292 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 FBRSL1Q9HCM7 1045 aaKnown RBP16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SLC2A4RGQ9NR83 387 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 HCN2Q9UL51 889 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 SCML1Q9UN30 329 aa16.46■□□□□ 0.23
CPSF4-201ENST00000292476 ENO4A6NNW6 628 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 UBXN8O00124 270 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 LZTS3O60299 673 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 RNASEH2AO75792 299 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 SLC25A14O95258 325 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 RPS17P08708 135 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 ALDOCP09972 364 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 ATP1B2P14415 290 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 IDO1P14902 403 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 LBPP18428 481 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 AKT1P31749 480 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 TIE1P35590 1138 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 BNIP2Q12982 314 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 GPRC6AQ5T6X5 926 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 RPS27LQ71UM5 84 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 FUNDC1Q8IVP5 155 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 MINDY1Q8N5J2 469 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 SIDT2Q8NBJ9 832 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 DDHD1Q8NEL9 900 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 OR2T3Q8NH03 318 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 BTN2A2Q8WVV5 523 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 RIOK2Q9BVS4 552 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 SARS2Q9NP81 518 aaKnown RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 MID1IP1Q9NPA3 183 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 SDR39U1Q9NRG7 319 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-201ENST00000292476 CD84Q9UIB8 345 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms