RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 NFU1Q9UMS0 254 aa26.17■■□□□ 1.78
SSU72-201ENST00000291386 CXorf49A8MYA2 514 aaPredicted RBP26.16■■□□□ 1.78
SSU72-201ENST00000291386 MATN4O95460 622 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 RPN2P04844 631 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 CBSLP0DN79 551 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 ENO3P13929 434 aaPredicted RBP26.16■■□□□ 1.78
SSU72-201ENST00000291386 TYRP1P17643 537 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 CBSP35520 551 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 ABRQ12979 859 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 EIF3IQ13347 325 aaKnown RBP26.16■■□□□ 1.78
SSU72-201ENST00000291386 NAB1Q13506 487 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 KYNUQ16719 465 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 TEX35Q5T0J7 233 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 FAM45BPQ6NSW5 357 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 FAM45AQ8TCE6 357 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 RSC1A1Q92681 617 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 TMEM121BQ9BXQ6 578 aaPredicted RBP26.16■■□□□ 1.78
SSU72-201ENST00000291386 STRADBQ9C0K7 418 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 RHOJQ9H4E5 214 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 NINJ2Q9NZG7 142 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 TMEM9Q9P0T7 183 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 VWA7Q9Y334 891 aa26.16■■□□□ 1.78
SSU72-201ENST00000291386 HGSO14964 777 aaPredicted RBP26.15■■□□□ 1.78
SSU72-201ENST00000291386 KDM1AO60341 852 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 MPC1LP0DKB6 136 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 CDKN2DP55273 166 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 SLMAPQ14BN4 828 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 RTP5Q14D33 572 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 HECTD2Q5U5R9 776 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 FBF1Q8TES7 1133 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 LCN9Q8WX39 176 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 JPH3Q8WXH2 748 aaPredicted RBP26.15■■□□□ 1.78
SSU72-201ENST00000291386 GATA6Q92908 595 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 FOPNLQ96NB1 174 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 CPNE1Q99829 537 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 HGH1Q9BTY7 390 aa26.15■■□□□ 1.78
SSU72-201ENST00000291386 CDC42EP4Q9H3Q1 356 aaKnown RBP26.15■■□□□ 1.78
SSU72-201ENST00000291386 TRMT6Q9UJA5 497 aaKnown RBP26.15■■□□□ 1.78
SSU72-201ENST00000291386 CCDC187A0A096LP49 1063 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 OR5K3A6NET4 321 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 TOX3O15405 576 aaPredicted RBP26.14■■□□□ 1.78
SSU72-201ENST00000291386 CAPN5O15484 640 aaPredicted RBP26.14■■□□□ 1.78
SSU72-201ENST00000291386 TPBGLP0DKB5 382 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 FDXRP22570 491 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 PHBP35232 272 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 ABCG1P45844 678 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 PPM1FP49593 454 aaPredicted RBP26.14■■□□□ 1.78
SSU72-201ENST00000291386 PRKG2Q13237 762 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 KLHL38Q2WGJ6 581 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 KBTBD12Q3ZCT8 623 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 LRRC8EQ6NSJ5 796 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 ARHGAP22Q7Z5H3 698 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 OOSP2Q86WS3 158 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 DCUN1D3Q8IWE4 304 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 GPATCH11Q8N954 259 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 CCDC74BQ96LY2 380 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 TWSG1Q9GZX9 223 aa26.14■■□□□ 1.78
SSU72-201ENST00000291386 TRABD2BA6NFA1 517 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 SLU7O95391 586 aaKnown RBP26.13■■□□□ 1.77
SSU72-201ENST00000291386 ANKRD34CP0C6C1 535 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 TNFRSF8P28908 595 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 GP5P40197 560 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 CCNFP41002 786 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 KIF26BQ2KJY2 2108 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 CYHR1Q6ZMK1 362 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 OR4E2Q8NGC2 313 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 WDR36Q8NI36 951 aaKnown RBP26.13■■□□□ 1.77
SSU72-201ENST00000291386 ZDHHC12Q96GR4 267 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 ZMYND15Q9H091 742 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 SRMSQ9H3Y6 488 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 HRASLS2Q9NWW9 162 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 NFS1Q9Y697 457 aa26.13■■□□□ 1.77
SSU72-201ENST00000291386 MATN2O00339 956 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 PSIP1O75475 530 aaKnown RBP26.12■■□□□ 1.77
SSU72-201ENST00000291386 PIAS1O75925 651 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 C1orf105O95561 183 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 SHMT2P34897 504 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 GFERP55789 205 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 GRB7Q14451 532 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 PHF19Q5T6S3 580 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 IGF2-ASQ6U949 168 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 AMIGO1Q86WK6 493 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 RASGRP3Q8IV61 690 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 CPNE9Q8IYJ1 553 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 CFAP61Q8NHU2 1237 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 MAGEC3Q8TD91 643 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 SKA2Q8WVK7 121 aaPredicted RBP26.12■■□□□ 1.77
SSU72-201ENST00000291386 VPS39Q96JC1 886 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 RBBP8Q99708 897 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 SEMA5BQ9P283 1151 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 TXNDC16Q9P2K2 825 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 ICKQ9UPZ9 632 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 PCDHGA8Q9Y5G5 932 aa26.12■■□□□ 1.77
SSU72-201ENST00000291386 FAM95CA0A1B0GW59 222 aa26.11■■□□□ 1.77
SSU72-201ENST00000291386 A0A1W2PNU3 283 aaPredicted RBP26.11■■□□□ 1.77
SSU72-201ENST00000291386 OR6C74A6NCV1 312 aa26.11■■□□□ 1.77
SSU72-201ENST00000291386 MPSTP25325 297 aa26.11■■□□□ 1.77
SSU72-201ENST00000291386 LSSP48449 732 aa26.11■■□□□ 1.77
SSU72-201ENST00000291386 GRTP1Q5TC63 336 aa26.11■■□□□ 1.77
SSU72-201ENST00000291386 TTC23LQ6PF05 361 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms