RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 KRT12Q99456 494 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 ERP44Q9BS26 406 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 TRIM51Q9BSJ1 452 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 MOCS1Q9NZB8 636 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 GRHL1Q9NZI5 618 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 IL1RAPL1Q9NZN1 696 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 CDC23Q9UJX2 597 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 RAXQ9Y2V3 346 aa8.92□□□□□ -0.98
HMGN1-201ENST00000288344 CFAP20Q9Y6A4 193 aaKnown RBP8.92□□□□□ -0.98
HMGN1-201ENST00000288344 PDZK1P1A8MUH7 402 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 BTN3A3O00478 584 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 LCE2BO14633 110 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 RAD51CO43502 376 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 KIF1CO43896 1103 aaKnown RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 PRICKLE3O43900 615 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 TNFSF15O95150 251 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 MATN4O95460 622 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 TYRP1P17643 537 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 CASQ1P31415 396 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 PAFAH1B1P43034 410 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 CAPZBP47756 277 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 ITGA8P53708 1063 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 TERF1P54274 439 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 MC2RQ01718 297 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 PLOD1Q02809 727 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 GUCY2DQ02846 1103 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 PPP1R7Q15435 360 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 C3orf38Q5JPI3 329 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 IZUMO3Q5VZ72 239 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 CYHR1Q6ZMK1 362 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 PDZD3Q86UT5 571 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 LRRC6Q86X45 466 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 DENND6AQ8IWF6 608 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 ADGRF3Q8IZF5 1079 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 FBXO39Q8N4B4 442 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 OR10G6Q8NH81 332 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 SNRNP27Q8WVK2 155 aaKnown RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 NCSTNQ92542 709 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 TFGQ92734 400 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 SLC41A2Q96JW4 573 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 C12orf66Q96MD2 445 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 ZNF768Q9H5H4 540 aaKnown RBP8.91□□□□□ -0.98
HMGN1-201ENST00000288344 FBXO8Q9NRD0 319 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 KLHL42Q9P2K6 505 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 LOXL2Q9Y4K0 774 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 HRH3Q9Y5N1 445 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 RPS6KL1Q9Y6S9 549 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 CFAP46Q8IYW2 2715 aa8.91□□□□□ -0.98
HMGN1-201ENST00000288344 IGHV5-51A0A0C4DH38 117 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 OR5K3A6NET4 321 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 H3BMH7 237 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CAPN5O15484 640 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 ZW10O43264 779 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 DUX1O43812 170 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 HAUS5O94927 633 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 FTH1P02794 183 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 ESR1P03372 595 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 F7P08709 466 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 OR56A5P0C7T3 313 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CD9P21926 228 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 ITPKBP27987 946 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PBLDP30039 288 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 SLC5A2P31639 672 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 HALP42357 657 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CLCN7P51798 805 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 TLE3Q04726 772 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CTBP1Q13363 440 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CRYMQ14894 314 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 AARS2Q5JTZ9 985 aaKnown RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 TEDDM1Q5T9Z0 273 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 TRMT10BQ6PF06 316 aaKnown RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 DNAJC14Q6Y2X3 702 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 UNC5AQ6ZN44 842 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CYS1Q717R9 158 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PRSS42Q7Z5A4 293 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 GALNT7Q86SF2 657 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PLXDC1Q8IUK5 500 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 C2CD4AQ8NCU7 369 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 ACVR1CQ8NER5 493 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 GIMAP7Q8NHV1 300 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 JPH3Q8WXH2 748 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 LRRC39Q96DD0 335 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CXorf40BQ96DE9 158 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 STAMBPL1Q96FJ0 436 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PPM1MQ96MI6 270 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 CMKLR1Q99788 373 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PITPNM3Q9BZ71 974 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 MVB12BQ9H7P6 319 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.98
HMGN1-201ENST00000288344 FOXJ2Q9P0K8 574 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 SNX24Q9Y343 169 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 FAM208BQ5VWN6 2430 aa8.9□□□□□ -0.98
HMGN1-201ENST00000288344 PCM1Q15154 2024 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 KRT37O76014 449 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 TTC4O95801 387 aa8.89□□□□□ -0.99
HMGN1-201ENST00000288344 IL2RAP01589 272 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms