RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 CHEK2O96017 543 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 CAPN1P07384 714 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ACADVLP49748 655 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 CCNG1P51959 295 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 DIO3P55073 304 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 SLC34A1Q06495 639 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 LRP8Q14114 963 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 BOP1Q14137 746 aaKnown RBP20.5■□□□□ 0.87
YBX3-202ENST00000279550 CCDC6Q16204 474 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ZNF423Q2M1K9 1284 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 PIGGQ5H8A4 983 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 EOGTQ5NDL2 527 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 PIP5KL1Q5T9C9 394 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 COQ10AQ96MF6 247 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 MRPL1Q9BYD6 325 aaKnown RBP20.5■□□□□ 0.87
YBX3-202ENST00000279550 RAD18Q9NS91 495 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 KRBA1A5PL33 1030 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 GIPC1O14908 333 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 CHRNB1P11230 501 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 XRCC1P18887 633 aaPredicted RBP20.5■□□□□ 0.87
YBX3-202ENST00000279550 MSH3P20585 1137 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ARL1P40616 181 aaPredicted RBP20.5■□□□□ 0.87
YBX3-202ENST00000279550 STX5Q13190 355 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ZNF284Q2VY69 593 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 AGBL4Q5VU57 503 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ICE2Q659A1 982 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 OGFOD2Q6N063 350 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.5■□□□□ 0.87
YBX3-202ENST00000279550 ZNF687Q8N1G0 1237 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 BTN2A2Q8WVV5 523 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 ZSCAN5AQ9BUG6 496 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 FBXL21Q9UKT6 434 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 MMP17Q9ULZ9 603 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 PCDHGA7Q9Y5G6 932 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 GPR45Q9Y5Y3 372 aa20.5■□□□□ 0.87
YBX3-202ENST00000279550 PSMD11O00231 422 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 EIF3FO00303 357 aaPredicted RBP20.49■□□□□ 0.87
YBX3-202ENST00000279550 NR5A2O00482 541 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 MRASO14807 208 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 MPC1LP0DKB6 136 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 ANPEPP15144 967 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 PSME3P61289 254 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 ZXDCQ2QGD7 858 aaPredicted RBP20.49■□□□□ 0.87
YBX3-202ENST00000279550 PLEKHS1Q5SXH7 462 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 UBE2R2Q712K3 238 aaPredicted RBP20.49■□□□□ 0.87
YBX3-202ENST00000279550 MIER2Q8N344 545 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 METTL6Q8TCB7 284 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 SLC25A23Q9BV35 468 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 SLC6A17Q9H1V8 727 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 AIG1Q9NVV5 245 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 NDE1Q9NXR1 346 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 STOML1Q9UBI4 398 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 OPTCQ9UBM4 332 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 SERGEFQ9UGK8 458 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 FADS3Q9Y5Q0 445 aa20.49■□□□□ 0.87
YBX3-202ENST00000279550 A0A1W2PP55 124 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 KRT87PA6NCN2 255 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 TMEM202A6NGA9 273 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 OR2AG2A6NM03 316 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 CFAP99D6REC4 459 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 AP2A2O94973 939 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 OTCP00480 354 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 MSX2P35548 267 aaPredicted RBP20.48■□□□□ 0.87
YBX3-202ENST00000279550 GCKP35557 465 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 CTSCP53634 463 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 TMEM92Q6UXU6 159 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 Q6ZS52 159 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 Q6ZSR9 355 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 SPATA19Q7Z5L4 167 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 RETREG3Q86VR2 466 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 SFRP1Q8N474 314 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 HDDC3Q8N4P3 179 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 RNF148Q8N7C7 305 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 RASGEF1AQ8N9B8 481 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 HIPK4Q8NE63 616 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 ASB11Q8WXH4 323 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 ELMO1Q92556 727 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 GLYATL1Q969I3 302 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 ATP6V1E2Q96A05 226 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 AP2M1Q96CW1 435 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 HBEGFQ99075 208 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 S100A14Q9HCY8 104 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 SDR39U1Q9NRG7 319 aaPredicted RBP20.48■□□□□ 0.87
YBX3-202ENST00000279550 MRPS17Q9Y2R5 130 aaKnown RBP20.48■□□□□ 0.87
YBX3-202ENST00000279550 LRRK1Q38SD2 2015 aa20.48■□□□□ 0.87
YBX3-202ENST00000279550 K7EPI3 171 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 WNT9AO14904 365 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 NRP2O60462 931 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 DNTTP04053 509 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 CAPN3P20807 821 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 STARD6P59095 220 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 MMEL1Q495T6 779 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 TMEM52BQ4KMG9 183 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 SWT1Q5T5J6 900 aaKnown RBP20.47■□□□□ 0.87
YBX3-202ENST00000279550 LAYNQ6UX15 382 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.47■□□□□ 0.87
YBX3-202ENST00000279550 MILR1Q7Z6M3 343 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 NRSN1Q8IZ57 195 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 PYDC1Q8WXC3 89 aa20.47■□□□□ 0.87
YBX3-202ENST00000279550 DTD2Q96FN9 168 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms