RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 EDNRBP24530 442 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ICAM3P32942 547 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 CBX5P45973 191 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 MTPNP58546 118 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TOP3AQ13472 1001 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 NFYCQ13952 458 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 POU4F3Q15319 338 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 GRIK4Q16099 956 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TTC23Q5W5X9 447 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 OR6B2Q6IFH4 312 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 PTRH1Q86Y79 214 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZNF555Q8NEP9 628 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 COQ8BQ96D53 544 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ASIC4Q96FT7 647 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 P2RY11Q96G91 374 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 REXO5Q96IC2 774 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 FAM167AQ96KS9 214 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 GPR22Q99680 433 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 MS4A7Q9GZW8 240 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 NXF2Q9GZY0 626 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 DUSP21Q9H596 190 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 LIN7BQ9HAP6 207 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TM9SF3Q9HD45 589 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 AMBNQ9NP70 447 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 OR5K4A6NMS3 321 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 A8MT66 165 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 LOC110117498-PIK3R3F6TDL0 507 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 PLD2O14939 933 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 HBP1O60381 514 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF37AP17032 561 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 HYAL2Q12891 473 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 SPANXN3Q5MJ09 141 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 IER5Q5VY09 327 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 METTL2BQ6P1Q9 378 aaKnown RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 AHSA2Q719I0 299 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZDHHC13Q8IUH4 622 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CCDC71Q8IV32 467 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 PHC2Q8IXK0 858 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CYP4Z2PQ8N1L4 340 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF540Q8NDQ6 660 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 PJA1Q8NG27 643 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZFPM2Q8WW38 1151 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 B3GNT5Q9BYG0 378 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TUBB1Q9H4B7 451 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CACNG4Q9UBN1 327 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ATPIF1Q9UII2 106 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 MYLKQ15746 1914 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 DNAJC25-GNG10A0A024R161 153 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 H0Y626 953 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 M0QYV0 167 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 BCKDKO14874 412 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 NPHS1O60500 1241 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 OR2B3O76000 313 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 C1RP00736 705 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 MLNP12872 115 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 AKAP5P24588 427 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF45Q02386 682 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 CSHL1Q14406 222 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 FAM110CQ1W6H9 321 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 FAM83EQ2M2I3 478 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF792Q3KQV3 632 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 C5orf22Q49AR2 442 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF789Q5FWF6 425 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TMEM135Q86UB9 458 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TMEM199Q8N511 208 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 NUP205Q92621 2012 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TESCQ96BS2 214 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 REPS1Q96D71 796 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 C19orf60Q96EN9 201 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 NTPCRQ9BSD7 190 aaKnown RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 CNPY3Q9BT09 278 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF556Q9HAH1 456 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 SPATA6Q9NWH7 488 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 STAP1Q9ULZ2 295 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 DNAJC15Q9Y5T4 150 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 MAFO75444 373 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 FCER2P06734 321 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 HOXD4P09016 255 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 IQCF3P0C7M6 154 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ITGA2P17301 1181 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 TALDO1P37837 337 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 GZMKP49863 264 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 DAB2P98082 770 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 RAD51Q06609 339 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
VAPB-201ENST00000265619 ZNF79Q15937 498 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 FLYWCH1Q4VC44 716 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 PPP1R26Q5T8A7 1209 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 TMEM81Q6P7N7 255 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CCDC190Q86UF4 302 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CYP4Z1Q86W10 505 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 HORMAD1Q86X24 394 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 PHYKPLQ8IUZ5 450 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms