RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 NME6O75414 186 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 ECI2O75521 394 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 KHDRBS3O75525 346 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 GADD45GO95257 159 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 DLDP09622 509 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 FOXM1Q08050 763 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 MBLAC2Q68D91 279 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TMEM220Q6QAJ8 160 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PRR23BQ6ZRT6 265 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 DBF4BQ8NFT6 615 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 SLC9A6Q92581 669 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ZBTB26Q9HCK0 441 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ABCB9Q9NP78 766 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 COQ6Q9Y2Z9 468 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 NOBOXO60393 691 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TBX18O95935 607 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PRR5P85299 388 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TYSND1Q2T9J0 566 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 NADK2Q4G0N4 442 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ADGRF1Q5T601 910 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PLPP4Q5VZY2 271 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 SCAIQ8N9R8 606 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TRPV1Q8NER1 839 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 FLCNQ8NFG4 579 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 GTPBP3Q969Y2 492 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 RPL10LQ96L21 214 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 MTERF1Q99551 399 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 ACTR3BQ9P1U1 418 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 GALPQ9UBC7 116 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ZNF221Q9UK13 617 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 MAN2B2Q9Y2E5 1009 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 FANCGO15287 622 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TLL1O43897 1013 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PSIP1O75475 530 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 C9P02748 559 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 CD247P20963 164 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 FAUP35544 74 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 GSK3BP49841 420 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 BCAP31P51572 246 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 GMFBP60983 142 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 IL18Q14116 193 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PLA2G4EQ3MJ16 856 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 ERI1Q8IV48 349 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 IPCEF1Q8WWN9 437 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 PIWIL1Q96J94 861 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PDCD10Q9BUL8 212 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 CACNG4Q9UBN1 327 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 CIDEBQ9UHD4 219 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TMEM233B4DJY2 109 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ENPP3O14638 875 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TIE1P35590 1138 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 HMGCS1Q01581 520 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PCLAFQ15004 111 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PTGES3Q15185 160 aaKnown RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 ZBED5Q49AG3 693 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 SIRPB2Q5JXA9 342 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 SMYD5Q6GMV2 418 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 OGFOD2Q6N063 350 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 RPTNQ6XPR3 784 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 NANOGNBQ7Z5D8 188 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 ZNF570Q96NI8 536 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 BRINP2Q9C0B6 783 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 TUBA8Q9NY65 449 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 NFKBIL1Q9UBC1 381 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 MTRRQ9UBK8 725 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
CD44-201ENST00000263398 GPC6Q9Y625 555 aaPredicted RBP10.57□□□□□ -0.72
CD44-201ENST00000263398 KAT6AQ92794 2004 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 MYH10P35580 1976 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 TOP3BO95985 862 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 RPLP0P05388 317 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 EPHX1P07099 455 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 C8BP07358 591 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 POU2F1P14859 743 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 EFNA1P20827 205 aaPredicted RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 JAG1P78504 1218 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 MYBPC1Q00872 1141 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 RBM48Q5RL73 367 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 FAM171BQ6P995 826 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 CHST15Q7LFX5 561 aaPredicted RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 FCRL4Q96PJ5 515 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 GPATCH1Q9BRR8 931 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 WRAP53Q9BUR4 548 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 PCBD2Q9H0N5 130 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 USP29Q9HBJ7 922 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 IL1RAPQ9NPH3 570 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 PHF11Q9UIL8 331 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 MYH2Q9UKX2 1941 aa10.56□□□□□ -0.72
CD44-201ENST00000263398 PHRF1Q9P1Y6 1649 aaKnown RBP10.56□□□□□ -0.72
CD44-201ENST00000263398 C9IYK1 514 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms