RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 FAM25GB3EWG6 89 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 CDK14O94921 469 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 SEC24AO95486 1093 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NUP107P57740 925 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 CAMK1Q14012 370 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TRIP10Q15642 601 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 AP1ARQ63HQ0 302 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 BHLHB9Q6PI77 547 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 UNC5DQ6UXZ4 953 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 DPPA4Q7L190 304 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ULK2Q8IYT8 1036 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 PIH1D2Q8WWB5 315 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NSMCE2Q96MF7 247 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 CCM2Q9BSQ5 444 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 KAT6AQ92794 2004 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 C17orf113A0A1B0GUU1 675 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FAM220BPB1ANY3 271 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NR5A2O00482 541 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 HGFP14210 728 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 RGS1Q08116 209 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 RBBP4Q09028 425 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TRIM25Q14258 630 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ARHGAP19Q14CB8 494 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 HNRNPA1L2Q32P51 320 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 PDCD4Q53EL6 469 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 IL23RQ5VWK5 629 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TYW3Q6IPR3 259 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NEK5Q6P3R8 708 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FAM92BQ6ZTR7 304 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 EFCAB3Q8N7B9 438 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ZFP28Q8NHY6 868 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 SPPL3Q8TCT6 385 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 UNKQ9C0B0 810 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 POLR3BQ9NW08 1133 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 B4GALT6Q9UBX8 382 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TRBV5-4A0A0C4DH59 114 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 PRR5-ARHGAP8B1AHC4 643 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 SLC25A14O95258 325 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 CLDN9O95484 217 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ADH1BP00325 375 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 SRCP12931 536 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 AKT2P31751 481 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ARHGAP8P85298 464 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 COX10Q12887 443 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 LMAN2Q12907 356 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NFYCQ13952 458 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 DHDDSQ86SQ9 333 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 PDPRQ8NCN5 879 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ASB12Q8WXK4 309 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FRMD6Q96NE9 622 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 BDH2Q9BUT1 245 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 MRPS26Q9BYN8 205 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 C1orf109Q9NX04 203 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 HEBP2Q9Y5Z4 205 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 KIAA0100Q14667 2235 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 G3V2L1 256 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SLC22A3O75751 556 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CFIP05156 583 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GLDCP23378 1020 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 FSHRP23945 695 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GPR15P49685 360 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 STX4Q12846 297 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 LSM12Q3MHD2 195 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GGTA1PQ4G0N0 100 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 LY6G5CQ5SRR4 150 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CXorf57Q6NSI4 855 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 C11orf88Q6PI97 169 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CFAP52Q8N1V2 620 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 RBM15BQ8NDT2 890 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SLC32A1Q9H598 525 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PARP14Q460N5 1801 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 C2orf71A6NGG8 1288 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 TPD52L2O43399 206 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 KLHL18O94889 574 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 S100A3P33764 101 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 HPCAL1P37235 193 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PDX1P52945 283 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 NRLP54845 237 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SEMA3AQ14563 771 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 TBC1D21Q8IYX1 336 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 DDHD1Q8NEL9 900 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SETD7Q8WTS6 366 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF184Q99676 751 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 C9orf16Q9BUW7 83 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SLITRK2Q9H156 845 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 C8orf33Q9H7E9 229 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 MEAF6Q9HAF1 191 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CDH7Q9ULB5 785 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ISM1B1AKI9 464 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CACNB4O00305 520 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 IDH3AP50213 366 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 UAP1L1Q3KQV9 507 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ZCCHC23Q6ZST2 131 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 HDDC2Q7Z4H3 204 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SLC30A8Q8IWU4 369 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ADGRG2Q8IZP9 1017 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 FKBP10Q96AY3 582 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms