RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 HEPHQ9BQS7 1158 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 ST6GALNAC4Q9H4F1 302 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 COQ10BQ9H8M1 238 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 IL36AQ9UHA7 158 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 TLL2Q9Y6L7 1015 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 A0A0G2JLL6 359 aaPredicted RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 RHPN2P1A8MT19 583 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 HMGB3O15347 200 aaKnown RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 SHOX2O60902 331 aaPredicted RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 RGS20O76081 388 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 PAPSS2O95340 614 aaPredicted RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 ALDH4A1P30038 563 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 CSKP41240 450 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 PRRT2Q7Z6L0 340 aaPredicted RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 HID1Q8IV36 788 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 COX18Q8N8Q8 333 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 PIWIL1Q96J94 861 aaKnown RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 MED31Q9Y3C7 131 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 DNM1LO00429 736 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 DCLK1O15075 740 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 PTPN2P17706 415 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 AP1S1P61966 158 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 RASSF6Q6ZTQ3 369 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 TMEM192Q8IY95 271 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 CNPPD1Q9BV87 410 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 PCBD2Q9H0N5 130 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 OR51V1Q9H2C8 321 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 SRMSQ9H3Y6 488 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 ALKBH4Q9NXW9 302 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 GADD45GO95257 159 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 VNN1O95497 513 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 AVPR1BP47901 424 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 TEAD4Q15561 434 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 CARTPTQ16568 116 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 TMLHEQ9NVH6 421 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 EURLQ9NYK6 297 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 SAGE2PA6NJ88 616 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 AIREO43918 545 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 CCNKO75909 580 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 HERVK_113P63132 956 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 BANPQ8N9N5 519 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 SIRPGQ9P1W8 387 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 RBMX2Q9Y388 322 aaKnown RBP10.08□□□□□ -0.8
PHF3-201ENST00000262043 NR2E1Q9Y466 385 aa10.08□□□□□ -0.8
PHF3-201ENST00000262043 DNASE1L1P49184 302 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 VBP1P61758 197 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 DLG1Q12959 904 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 TSC22D1Q15714 1073 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 USP30Q70CQ3 517 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZZZ3Q8IYH5 903 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 SLAIN1Q8ND83 568 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 SLC38A4Q969I6 547 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 C12orf66Q96MD2 445 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 GAS2L1Q99501 681 aaPredicted RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 SLC28A3Q9HAS3 691 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ATXN10Q9UBB4 475 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 OR51F1A6NGY5 319 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 B3GALT2O43825 422 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 MTTPP55157 894 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 RAB2AP61019 212 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 GANABQ14697 944 aaKnown RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 NIPA2Q8N8Q9 360 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 SETD6Q8TBK2 473 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 FATE1Q969F0 183 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 HAVCR1Q96D42 359 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 NSMCE3Q96MG7 304 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 CITED4Q96RK1 184 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 FEM1AQ9BSK4 669 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 COMMD4Q9H0A8 199 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZNF282Q9UDV7 671 aaPredicted RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 PDE10AQ9Y233 779 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 MYH14Q7Z406 1995 aaKnown RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 PDPK1O15530 556 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 KERAO60938 352 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 CREB1P16220 341 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 GNAZP19086 355 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 CHRNA4P43681 627 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 NAPRTQ6XQN6 538 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZNF554Q86TJ5 538 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 SLC51AQ86UW1 340 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 HERVK_113Q902F9 699 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZBED6CLQ96FA7 236 aaPredicted RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 GRHL1Q9NZI5 618 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 TBC1D24Q9ULP9 559 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 RWDD3Q9Y3V2 267 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ESR1P03372 595 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 HLA-DQB2P05538 268 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
PHF3-201ENST00000262043 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHF3-201ENST00000262043 TARDBPQ13148 414 aaKnown RBP eCLIP10.07□□□□□ -0.8
PHF3-201ENST00000262043 DPYSL2Q16555 572 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ZCCHC12Q6PEW1 402 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 ULK3Q6PHR2 472 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 SLC35G5Q96KT7 338 aa10.07□□□□□ -0.8
PHF3-201ENST00000262043 GATA5Q9BWX5 397 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms