RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 KYNUQ16719 465 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 DCUN1D3Q8IWE4 304 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 SIDT2Q8NBJ9 832 aaKnown RBP18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 OR5AR1Q8NGP9 310 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 WDR36Q8NI36 951 aaKnown RBP18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 FBF1Q8TES7 1133 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■■■■■ 64.2
CYSTM1-201ENST00000261811 RAD51AP1Q96B01 352 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 NXPE2Q96DL1 559 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 LIN37Q96GY3 246 aaPredicted RBP18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 NDNQ99608 321 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 NUDT22Q9BRQ3 303 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 HGH1Q9BTY7 390 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 RAB11FIP5Q9BXF6 653 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 NRSN2Q9GZP1 204 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 RHOJQ9H4E5 214 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 HRASLS2Q9NWW9 162 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 EPHA6Q9UF33 1036 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 ENTPD2Q9Y5L3 495 aa18.24■□□□□ 0.51
CYSTM1-201ENST00000261811 PRAMEF33A0A0G2JMD5 474 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 FAM159BA6NKW6 160 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 HGSO14964 777 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 TOX3O15405 576 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 MPC1LP0DKB6 136 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 GABRB3P28472 473 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SPRP35270 261 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 GP5P40197 560 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 ZFP36L1Q07352 338 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 KLHL38Q2WGJ6 581 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 HECTD2Q5U5R9 776 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 ZC3HC1Q86WB0 502 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 AMIGO1Q86WK6 493 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 VRK3Q8IV63 474 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 LSMEM2Q8N112 164 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 OR4E2Q8NGC2 313 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 OR52E1Q8NGJ3 308 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 TSPAN17Q96FV3 270 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 ATXN7L3BQ96GX2 97 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 ELMO2Q96JJ3 720 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CYTH2Q99418 400 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 IGHV5-10-1A0A0J9YXX1 117 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 PABPN1LA6NDY0 278 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 OR5K3A6NET4 321 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CAPN5O15484 640 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CATP04040 527 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 F7P08709 466 aaPredicted RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 MAP4P27816 1152 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CSTF2P33240 577 aaKnown RBP eCLIP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 GBX1Q14549 363 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 KBTBD12Q3ZCT8 623 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 GRTP1Q5TC63 336 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 IRGCQ6NXR0 463 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 RAB11FIP2Q7L804 512 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SLITRK4Q8IW52 837 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 PPM1NQ8N819 430 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CD200R1Q8TD46 325 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CCDC74BQ96LY2 380 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CD180Q99467 661 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 CDC42EP4Q9H3Q1 356 aaKnown RBP18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SEMA6CQ9H3T2 930 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SYTL2Q9HCH5 934 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SLC17A6Q9P2U8 582 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 SLC39A10Q9ULF5 831 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 AK5Q9Y6K8 562 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 IKBKGQ9Y6K9 419 aa18.23■□□□□ 0.51
CYSTM1-201ENST00000261811 MN1Q10571 1320 aaPredicted RBP18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 FAM95CA0A1B0GW59 222 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 OR6C74A6NCV1 312 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 MAP3K7O43318 606 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 ZBTB14O43829 449 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 RASSF9O75901 435 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 MATN4O95460 622 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 THRAP10827 490 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 MCM3P25205 808 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 ECHS1P30084 290 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 CSF2RBP32927 897 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 IL2P60568 153 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 ACSBG2Q5FVE4 666 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 SNAP47Q5SQN1 464 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 RBM20Q5T481 1227 aaKnown RBP18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 TRMT10CQ7L0Y3 403 aaKnown RBP18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 MYO1HQ8N1T3 1032 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 AGBL5Q8NDL9 886 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 RSC1A1Q92681 617 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 TGM7Q96PF1 710 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 POLR1BQ9H9Y6 1135 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 NINJ2Q9NZG7 142 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 OR6C2Q9NZP2 312 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 OGFRQ9NZT2 677 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 PDP2Q9P2J9 529 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 GALPQ9UBC7 116 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 LNPEPQ9UIQ6 1025 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 PSAT1Q9Y617 370 aa18.22■□□□□ 0.51
CYSTM1-201ENST00000261811 TRABD2BA6NFA1 517 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 C2orf74A8MZ97 194 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 ACSL3O95573 720 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 C9P02748 559 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 JMJD7P0C870 316 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 HOXB3P14651 431 aaPredicted RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 SAT1P21673 171 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms