RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TRPV1Q8NER1 839 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 NKD2Q969F2 451 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GORASP1Q9BQQ3 440 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 TVP23BQ9NYZ1 205 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 B4DGG1 531 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GADD45GO95257 159 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 C8GP07360 202 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GJA1P17302 382 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 FMO3P31513 532 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 BCAP31P51572 246 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 AP1S1P61966 158 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 TIGD5Q53EQ6 642 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GPR151Q8TDV0 419 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GFM1Q96RP9 751 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 DNAAF2Q9NVR5 837 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 TRNAU1APQ9NX07 287 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 RAB26Q9ULW5 256 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 CFAP20Q9Y6A4 193 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 LCA5LO95447 670 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GPD2P43304 727 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 KHKP50053 298 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 PRR5P85299 388 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 OR5T3Q8NGG3 340 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 BRSK1Q8TDC3 778 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 IL12RB2Q99665 862 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 PGRP06401 933 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 HOXC12P31275 282 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 C1QTNF8P60827 252 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 C2orf27AQ580R0 203 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 SYPL2Q5VXT5 272 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 EGFLAMQ63HQ2 1017 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 MFSD5Q6N075 450 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 OR5AK3PQ8NH89 298 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 HM13Q8TCT9 377 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GATA5Q9BWX5 397 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 WRAP73Q9P2S5 460 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 UGT1A6P19224 532 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 UGT1A1P22309 533 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 UGT1A4P22310 534 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 HTR7P34969 479 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 UGT1A3P35503 534 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 RAB25P57735 213 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 NFKB2Q00653 900 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ZDHHC21Q8IVQ6 265 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SRFBP1Q8NEF9 429 aaKnown RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SH3RF2Q8TEC5 729 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 BORCS5Q969J3 196 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 PYCR2Q96C36 320 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SLC25A36Q96CQ1 311 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 GKN1Q9NS71 199 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 DTLQ9NZJ0 730 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 STOML2Q9UJZ1 356 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ERVK-11Q9UQG0 969 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 FAM240BA0A1B0GVZ2 78 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SLC30A4O14863 429 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 HLA-DQB2P05538 268 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 AQP4P55087 323 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TXNL4AP83876 142 aaKnown RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 CARD16Q5EG05 197 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF613Q6PF04 617 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ENPP7Q6UWV6 458 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF366Q8N895 744 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TOP1MTQ969P6 601 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 CORO1CQ9ULV4 474 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ACP5P13686 325 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 IL7RP16871 459 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 RPS24P62847 133 aaKnown RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TARDBPQ13148 414 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 NFATC2Q13469 925 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 IDNKQ5T6J7 187 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 C1orf109Q9NX04 203 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 RGS17Q9UGC6 210 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ALPPP05187 535 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 BDKRB1P46663 353 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 HYAL2Q12891 473 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 USP30Q70CQ3 517 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 DEFB119Q8N690 84 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 DBF4BQ8NFT6 615 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TRPV5Q9NQA5 729 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SNX7Q9UNH6 387 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 NR2E1Q9Y466 385 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 A0A0G2JLL6 359 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 A0A1W2PQ72 361 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SCELO95171 688 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 PTGER3P43115 390 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 RPS14P62263 151 aaKnown RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 PPP3R1P63098 170 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms