RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CCR7P32248 378 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC6A11P48066 632 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 CLCN4P51793 760 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 NAA20P61599 178 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 MAPRE2Q15555 327 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 RFTN2Q52LD8 501 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 GPRC6AQ5T6X5 926 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 SBSNQ6UWP8 590 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 GDPD4Q6W3E5 623 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 TPRG1Q6ZUI0 275 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 UBE2R2Q712K3 238 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 CATSPER1Q8NEC5 780 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 OR2A12Q8NGT7 310 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 DUS2Q9NX74 493 aaKnown RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 POP4O95707 220 aaKnown RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 OLFM2O95897 454 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 GSNP06396 782 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 RFC2P35250 354 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 ATP1A4Q13733 1029 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 PAGE3Q5JUK9 113 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 GRAMD4Q6IC98 578 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 DOK6Q6PKX4 331 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 ANKRD46Q86W74 232 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 CPSF7Q8N684 471 aaKnown RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 PCYOX1LQ8NBM8 494 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 SCRN2Q96FV2 425 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 NAA50Q9GZZ1 169 aaKnown RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 PFDN4Q9NQP4 134 aa14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 INTS7Q9NVH2 962 aaKnown RBP14.35□□□□□ -0.11
TRAFD1-201ENST00000257604 CCDC154A6NI56 674 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC26A3P40879 764 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 MTPNP58546 118 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 LDLRAP1Q5SW96 308 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 CHERPQ8IWX8 916 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 NUMA1Q14980 2115 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 KANSL1LA0AUZ9 987 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 J3QRK9 145 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HOXB8P17481 243 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 GPX3P22352 226 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HALP42357 657 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 NRIP1P48552 1158 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 SUOXP51687 545 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 ST8SIA6P61647 398 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 FNDC3BQ53EP0 1204 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 KANK2Q63ZY3 851 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 OR10Q1Q8NGQ4 319 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 CYGBQ8WWM9 190 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 FBXL8Q96CD0 374 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 PAIP1Q9H074 479 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 TRANK1O15050 2925 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 TRIM38O00635 465 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 WDR47O94967 919 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 H6PDO95479 791 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 MLYCDO95822 493 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HIST1H2AGP0C0S8 130 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 PCNAP12004 261 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HIST1H2ADP20671 130 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 C6orf136Q5SQH8 315 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 OGFOD2Q6N063 350 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 CERS6Q6ZMG9 384 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 SFRP1Q8N474 314 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HIST1H2AHQ96KK5 128 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 TSSK3Q96PN8 268 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 HIST1H2AJQ99878 128 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 H2AFJQ9BTM1 129 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 P2RY12Q9H244 342 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 FAM83DQ9H4H8 585 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF385DQ9H6B1 395 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 TIMMDC1Q9NPL8 285 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 OLAHQ9NV23 265 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 STOML2Q9UJZ1 356 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 ZNF490Q9ULM2 529 aaPredicted RBP14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 SLC22A14Q9Y267 594 aa14.34□□□□□ -0.11
TRAFD1-201ENST00000257604 MOSPD3O75425 235 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 B3GALT4O96024 378 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 RPS17P08708 135 aaKnown RBP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 UROSP10746 265 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 DGKGP49619 791 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 PPP1R8Q12972 351 aaKnown RBP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 LRP8Q14114 963 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 PLCL1Q15111 1095 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 NEDD8Q15843 81 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 ZNF783Q6ZMS7 281 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 ADIPOR2Q86V24 386 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 KRTCAP2Q8N6L1 136 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 CANT1Q8WVQ1 401 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 RMND5BQ96G75 393 aaPredicted RBP14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 SLC2A11Q9BYW1 496 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 MAP10Q9P2G4 905 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 ZNF510Q9Y2H8 683 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 A0A0C4DFX4 3053 aa14.33□□□□□ -0.12
TRAFD1-201ENST00000257604 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms