RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 IL12AP29459 219 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 PRDX3P30048 256 aaKnown RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 RGRP47804 291 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 GLYATQ6IB77 296 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 SCIMPQ6UWF3 145 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 TEX26Q8N6G2 289 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 BPIFB6Q8NFQ5 453 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 OR13C4Q8NGS5 318 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 TMBIM1Q969X1 311 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 DERL2Q9GZP9 239 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 LHPPQ9H008 270 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 ZIM2Q9NZV7 527 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 PSME2Q9UL46 239 aa16.68■□□□□ 0.26
FOXA1-201ENST00000250448 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
FOXA1-201ENST00000250448 TRAV19A0A0A6YYK7 116 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 SYNCRIPO60506 623 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 TULP3O75386 442 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 CLPXO76031 633 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RHOP08100 348 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 STC1P52823 247 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ERVK-8P63133 956 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 KCNC4Q03721 635 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ZNF235Q14590 738 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 TSNQ15631 228 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 NIPAL1Q6NVV3 410 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 GRASPQ7Z6J2 395 aaPredicted RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 OR2T11Q8NH01 316 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ISG20Q96AZ6 181 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 CENPOQ9BU64 300 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PDFQ9HBH1 243 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 SYTL2Q9HCH5 934 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PCDHB3Q9Y5E6 796 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RSL1D1O76021 490 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ALPLP05186 524 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 UROSP10746 265 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 OXCT1P55809 520 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 GPM6BQ13491 265 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RGS21Q2M5E4 152 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RBM48Q5RL73 367 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 SLC2A7Q6PXP3 512 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PAQR3Q6TCH7 311 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 Q6ZNB5 142 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 THAP5Q7Z6K1 395 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 HID1Q8IV36 788 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PEX13Q92968 403 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 MAGED4Q96JG8 741 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 NSMCE3Q96MG7 304 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 INIPQ9NRY2 104 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RIC8BQ9NVN3 520 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ERGIC3Q9Y282 383 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 B3GNT3Q9Y2A9 372 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 NOTCH4Q99466 2003 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 CHD5Q8TDI0 1954 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ANKRD12Q6UB98 2062 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 LEFTY2O00292 366 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 MOSPD3O75425 235 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PRSS23O95084 383 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 TCF3P15923 654 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 PUS10Q3MIT2 529 aaKnown RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
FOXA1-201ENST00000250448 CLEC4FQ8N1N0 589 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 OR4L1Q8NH43 312 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 MAGEH1Q9H213 219 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 ADNPQ9H2P0 1102 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 SEPT3Q9UH03 358 aa16.67■□□□□ 0.26
FOXA1-201ENST00000250448 UBA6A0AVT1 1052 aaPredicted RBP16.66■□□□□ 0.26
FOXA1-201ENST00000250448 NPPAP01160 153 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 FGF1P05230 155 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 PRSS56P0CW18 603 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 CRHBPP24387 322 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 GSTM2P28161 218 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 MLLT10P55197 1068 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 RAD51Q06609 339 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 RBBP7Q16576 425 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 TYSND1Q2T9J0 566 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 STK32CQ86UX6 486 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 ZFAND4Q86XD8 727 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 DTWD1Q8N5C7 304 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 ZSWIM3Q96MP5 696 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 CSF3RQ99062 836 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 RAD21L1Q9H4I0 556 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 ZNF225Q9UK10 706 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 PCTPQ9UKL6 214 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 C1orf232A0A0U1RR37 186 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 NPEPPSL1A6NEC2 478 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 SYCE1LA8MT33 242 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 C5orf67F2Z3F1 127 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 CDC7O00311 574 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 PIRTP0C851 137 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 IL7RP16871 459 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 HLA-DPA1P20036 260 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 AGTR2P50052 363 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 GTF2IRD2BQ6EKJ0 949 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
FOXA1-201ENST00000250448 GTF2IRD2Q86UP8 949 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 IQCF2Q8IXL9 164 aa16.66■□□□□ 0.26
FOXA1-201ENST00000250448 C8orf59Q8N0T1 100 aaPredicted RBP16.66■□□□□ 0.26
FOXA1-201ENST00000250448 APOL5Q9BWW9 433 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms