RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PCBP2Q15366 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
LSM8-201ENST00000249299 UAP1L1Q3KQV9 507 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 FBXO39Q8N4B4 442 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 CHCHD4Q8N4Q1 142 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 AVL9Q8NBF6 648 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 CEP76Q8TAP6 659 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 UBTD2Q8WUN7 234 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 NAT14Q8WUY8 206 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 SKA2Q8WVK7 121 aaPredicted RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 TFGQ92734 400 aaPredicted RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 PDXPQ96GD0 296 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 LOXL4Q96JB6 756 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 CNDP1Q96KN2 507 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 CCDC138Q96M89 665 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 GSDMCQ9BYG8 508 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 MVB12BQ9H7P6 319 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 PTBP2Q9UKA9 531 aaKnown RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 PDE10AQ9Y233 779 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 STK38LQ9Y2H1 464 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 PCYT1BQ9Y5K3 369 aaPredicted RBP12.63□□□□□ -0.39
LSM8-201ENST00000249299 CACNA1IQ9P0X4 2223 aa12.63□□□□□ -0.39
LSM8-201ENST00000249299 ZNF839A8K0R7 811 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MYO1CO00159 1063 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 DFNA5O60443 496 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 SNNO75324 88 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 SUPT3HO75486 399 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 C1orf105O95561 183 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 PDHA2P29803 388 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PBLDP30039 288 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 HALP42357 657 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PREPP48147 710 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PIK3CGP48736 1102 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 HK2P52789 917 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 GYS2P54840 703 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 C21orf59P57076 290 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.39
LSM8-201ENST00000249299 GNGT1P63211 74 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 IRX4P78413 519 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 STX3Q13277 289 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 SETDB1Q15047 1291 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 CHI3L2Q15782 390 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 SYT12Q8IV01 421 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 HID1Q8IV36 788 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 TBC1D21Q8IYX1 336 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 OR5K2Q8NHB8 316 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PPP1R14CQ8TAE6 165 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 DLG3Q92796 817 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 TSACCQ96A04 125 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 GRAMD1AQ96CP6 724 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 CHMP6Q96FZ7 201 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 C7orf26Q96N11 449 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ZNF317Q96PQ6 595 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 ZDHHC5Q9C0B5 715 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 DRC3Q9H069 523 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MLXIPLQ9NP71 852 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MRPL40Q9NQ50 206 aaKnown RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 CD274Q9NZQ7 290 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 POLG2Q9UHN1 485 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MOSPD1Q9UJG1 213 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 IKZF3Q9UKT9 509 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PRKAB1Q9Y478 270 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ARHGEF33A8MVX0 844 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 UBXN8O00124 270 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 TGDSO95455 350 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MLYCDO95822 493 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 WNT1P04628 370 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 RXRGP48443 463 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 NAGLUP54802 743 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ABRQ12979 859 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ELOCQ15369 112 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ANGPT1Q15389 498 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PHKG1Q16816 387 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PFKFB4Q16877 469 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 CFAP157Q5JU67 520 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ZNF678Q5SXM1 525 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 ANKS6Q68DC2 871 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 NAPRTQ6XQN6 538 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 CEP68Q76N32 757 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 PHACTR4Q8IZ21 702 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 PTGR2Q8N8N7 351 aaPredicted RBP12.62□□□□□ -0.39
LSM8-201ENST00000249299 PRRX2Q99811 253 aa12.62□□□□□ -0.39
LSM8-201ENST00000249299 MECRQ9BV79 373 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms