RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 CASC4Q6P4E1 433 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 KRT222Q8N1A0 295 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 D2HGDHQ8N465 521 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 EFHD1Q9BUP0 239 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 KIFC1Q9BW19 673 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 MRM3Q9HC36 420 aaKnown RBP20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 IL17BQ9UHF5 180 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 SOX13Q9UN79 622 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 ICKQ9UPZ9 632 aa20.52■□□□□ 0.88
HCFC1R1-201ENST00000248089 SNRNP200O75643 2136 aaKnown RBP20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 GOLGA6L10A0A0M3HER8 536 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 SLC9B1P1A6NJY1 282 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 C2orf74A8MZ97 194 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 GOLGA8KD6RF30 607 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 GOLGA8TH3BQL2 631 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 GOLGA8MH3BSY2 632 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PRMT5O14744 637 aaPredicted RBP20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 ZNF185O15231 689 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PHF2O75151 1096 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 NDUFS3O75489 264 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 TMEM63AO94886 807 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 VAPBO95292 243 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PRKAR1AP10644 381 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 DLSTP36957 453 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PLOD1Q02809 727 aaPredicted RBP20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 TBR1Q16650 682 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 CYP1B1Q16678 543 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 LINC00303Q3SY05 128 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PTRHD1Q6GMV3 140 aaKnown RBP20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PWWP2BQ6NUJ5 590 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 CARFQ8N187 725 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 MPP5Q8N3R9 675 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 ZNF843Q8N446 348 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 SLC45A3Q96JT2 553 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 KLHL25Q9H0H3 589 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 C1GALT1Q9NS00 363 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 GNPTGQ9UJJ9 305 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 CROTQ9UKG9 612 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 PLAGL1Q9UM63 463 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 SNX12Q9UMY4 172 aa20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 MRPS18BQ9Y676 258 aaKnown RBP20.51■□□□□ 0.87
HCFC1R1-201ENST00000248089 COL6A6A6NMZ7 2263 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 PRDX3P30048 256 aaKnown RBP20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 SHMT2P34897 504 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 MAGEA6P43360 314 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 EIF3BP55884 814 aaKnown RBP20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 TUBB4BP68371 445 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 TMED2Q15363 201 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 HOOK3Q86VS8 718 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 VRK3Q8IV63 474 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 TBC1D21Q8IYX1 336 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 SLC22A15Q8IZD6 547 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 ADGRF3Q8IZF5 1079 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 OR5K2Q8NHB8 316 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 CFAP61Q8NHU2 1237 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 ACTRT1Q8TDG2 376 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 ASZ1Q8WWH4 475 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 STARD8Q92502 1023 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 CPT1BQ92523 772 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 MED8Q96G25 268 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 CARD6Q9BX69 1037 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 FANCEQ9HB96 536 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 ACTR10Q9NZ32 417 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 SAMD15Q9P1V8 674 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 POLG2Q9UHN1 485 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 BTRCQ9Y297 605 aa20.5■□□□□ 0.87
HCFC1R1-201ENST00000248089 USP27XA6NNY8 438 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 NKX2-8O15522 239 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 NTRK1P04629 796 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 APOA4P06727 396 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 FAM87AP0C7U9 286 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 CCNYL3P0C7X3 344 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 SPTBP11277 2137 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 PVRP15151 417 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 ST6GAL1P15907 406 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 ARNTP27540 789 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 MRNIPQ6NTE8 343 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 C16orf46Q6P387 395 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 CAND1Q86VP6 1230 aaKnown RBP20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 TMEM126BQ8IUX1 230 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 GRK7Q8WTQ7 553 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 TRIM56Q9BRZ2 755 aaKnown RBP20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 BAHCC1Q9P281 2608 aa20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 GCN1Q92616 2671 aaKnown RBP20.49■□□□□ 0.87
HCFC1R1-201ENST00000248089 PIPSLA2A3N6 862 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 MAP3K7O43318 606 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 KATNA1O75449 491 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 SCRG1O75711 98 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 MT-ND3P03897 115 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 CDC20Q12834 499 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 DNAJC21Q5F1R6 531 aaKnown RBP20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 UNC5AQ6ZN44 842 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 SDCCAG8Q86SQ7 713 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 TRIM73Q86UV7 250 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 BPHLQ86WA6 291 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 EXD3Q8N9H8 876 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 GSDMBQ8TAX9 411 aa20.48■□□□□ 0.87
HCFC1R1-201ENST00000248089 ZNF669Q96BR6 464 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms