RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ATL1Q8WXF7 558 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNF382Q96SR6 550 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 MYOCQ99972 504 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 TNFRSF12AQ9NP84 129 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 USP36Q9P275 1121 aaKnown RBP18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 MOSPD1Q9UJG1 213 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 SLC12A4Q9UP95 1085 aa18.3■□□□□ 0.52
TNFSF9-201ENST00000245817 KRBA1A5PL33 1030 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 E9PBE3 544 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 KLHL41O60662 606 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 KATNA1O75449 491 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 UROSP10746 265 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 EPB42P16452 691 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 SCTRP47872 440 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 RASSF2P50749 326 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 CCNG1P51959 295 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 RPA4Q13156 261 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 NFE2L1Q14494 772 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 LSM12Q3MHD2 195 aaKnown RBP18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 ANO7Q6IWH7 933 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 UBALD2Q8IYN6 164 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 CEP70Q8NHQ1 597 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 CCDC138Q96M89 665 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 OR52B2Q96RD2 323 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 TMEM79Q9BSE2 394 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 IPPKQ9H8X2 491 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 MEAF6Q9HAF1 191 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 CD93Q9NPY3 652 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 ARMCX1Q9P291 453 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 MUTYHQ9UIF7 546 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 RRP15Q9Y3B9 282 aaKnown RBP18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 ASB1Q9Y576 335 aa18.29■□□□□ 0.52
TNFSF9-201ENST00000245817 HNRNPA2B1P22626 353 aaKnown RBP18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 OXTRP30559 389 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 AKT2P31751 481 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 GGT5P36269 586 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 GDF5P43026 501 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 KRT72Q14CN4 511 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNF658BQ4V348 819 aaPredicted RBP18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 KANK2Q63ZY3 851 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 MILR1Q7Z6M3 343 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 SYVN1Q86TM6 617 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 HOMEZQ8IX15 550 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 DDIASQ8IXT1 998 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNF687Q8N1G0 1237 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 MAGEC3Q8TD91 643 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 TWIST2Q8WVJ9 160 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 NUSAP1Q9BXS6 441 aaKnown RBP18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 SLC32A1Q9H598 525 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 GULP1Q9UBP9 304 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 EBF1Q9UH73 591 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 ARHGEF33A8MVX0 844 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 HNRNPCL1O60812 293 aaKnown RBP18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 UNC5CO95185 931 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 CDC16Q13042 620 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 FAM91A1Q658Y4 838 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 LRRC70Q7Z2Q7 622 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 C11orf96Q7Z7L8 435 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 FBXL8Q96CD0 374 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 C19orf60Q96EN9 201 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 NSL1Q96IY1 281 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 CYP8B1Q9UNU6 501 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 DNAJC15Q9Y5T4 150 aa18.28■□□□□ 0.52
TNFSF9-201ENST00000245817 IFRD1O00458 451 aaPredicted RBP18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 SDHDO14521 159 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 ZNF217O75362 1048 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 OR4F21O95013 312 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 JUNP05412 331 aaKnown RBP18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 HOXC4P09017 264 aaPredicted RBP18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 KELP23276 732 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 INHBCP55103 352 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 SPRED3Q2MJR0 410 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 TMEM31Q5JXX7 168 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 CHST15Q7LFX5 561 aaPredicted RBP18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 GALNT13Q8IUC8 556 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 OXR1Q8N573 874 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 SNX31Q8N9S9 440 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 OR52B6Q8NGF0 335 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 ACTRT2Q8TDY3 377 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 MAELQ96JY0 434 aaKnown RBP18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 FOXQ1Q9C009 403 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 MRGBPQ9NV56 204 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.52
TNFSF9-201ENST00000245817 MUC3AQ02505 3323 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 KCNJ13O60928 360 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 WDR47O94967 919 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 CBX6O95503 412 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 C1orf105O95561 183 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 IGLV3-19P01714 112 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 ESRRAP11474 423 aaPredicted RBP18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 HTR1BP28222 390 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 PRDX3P30048 256 aaKnown RBP18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 BDKRB1P46663 353 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 FOXA1P55317 472 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 UBAP2LQ14157 1087 aaKnown RBP18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 UGT3A2Q3SY77 523 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 RASGRP3Q8IV61 690 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 CHCHD4Q8N4Q1 142 aa18.26■□□□□ 0.51
TNFSF9-201ENST00000245817 CDYL2Q8N8U2 506 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms