RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 AGAP11Q8TF27 550 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 OR1E3Q8WZA6 343 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 SNX19Q92543 992 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 PRR11Q96HE9 360 aaPredicted RBP18.14■□□□□ 0.49
SNX17-201ENST00000233575 HIST1H2AHQ96KK5 128 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 HIST1H2AJQ99878 128 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 ORAI3Q9BRQ5 295 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 H2AFJQ9BTM1 129 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 HGH1Q9BTY7 390 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 NUF2Q9BZD4 464 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 CD244Q9BZW8 370 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 DPEP2Q9H4A9 486 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 HEY2Q9UBP5 337 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.14■□□□□ 0.49
SNX17-201ENST00000233575 GPSM3Q9Y4H4 160 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 A0A0C4DFX4 3053 aa18.14■□□□□ 0.49
SNX17-201ENST00000233575 PRSS38A1L453 326 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 CCNT2O60583 730 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 SERPINB3P29508 390 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 METRNLQ641Q3 311 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TRPM8Q7Z2W7 1104 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 GOLGA7Q7Z5G4 137 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 GALNT13Q8IUC8 556 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TEX9Q8N6V9 391 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 OR56A4Q8NGH8 313 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 MCOLN3Q8TDD5 553 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 PYCR2Q96C36 320 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 CDK15Q96Q40 435 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TRIM54Q9BYV2 358 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 ZDHHC5Q9C0B5 715 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TNPO3Q9Y5L0 923 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 GON4LQ3T8J9 2241 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 EML5Q05BV3 1969 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 K7ESF4 209 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 HDAC3O15379 428 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 DIAPH2O60879 1101 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 SKAP2O75563 359 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 C1orf105O95561 183 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 HOXC4P09017 264 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 CDKL1Q00532 357 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 DMTNQ08495 405 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 DMWDQ09019 674 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TUBB3Q13509 450 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 GTF2H2Q13888 395 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 GTF2H2CQ6P1K8 395 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 EPGNQ6UW88 154 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 Q6ZSR6 202 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 RD3Q7Z3Z2 195 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 SYVN1Q86TM6 617 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 MTDHQ86UE4 582 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 SLC22A18ASQ8N1D0 253 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 OR13H1Q8NG92 308 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 UBTD2Q8WUN7 234 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TSACCQ96A04 125 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 SCARF2Q96GP6 870 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 ATG10Q9H0Y0 220 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 OSGEPL1Q9H4B0 414 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 WDR55Q9H6Y2 383 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 NOL11Q9H8H0 719 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 CARS2Q9HA77 564 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 WDR37Q9Y2I8 494 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 TRAF6Q9Y4K3 522 aa18.13■□□□□ 0.49
SNX17-201ENST00000233575 CFAP20Q9Y6A4 193 aaKnown RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 DNMT3AQ9Y6K1 912 aaPredicted RBP18.13■□□□□ 0.49
SNX17-201ENST00000233575 CCT8L1PA6NM43 557 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 PRAMEF26H0Y7S4 382 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 OR7A17O14581 309 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 CATP04040 527 aaKnown RBP18.12■□□□□ 0.49
SNX17-201ENST00000233575 MAP4P27816 1152 aaKnown RBP18.12■□□□□ 0.49
SNX17-201ENST00000233575 CXCL12P48061 93 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 RBBP7Q16576 425 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 SPRED3Q2MJR0 410 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 PHC3Q8NDX5 983 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 WDR92Q96MX6 357 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 FOPNLQ96NB1 174 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 PKP4Q99569 1192 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 SIKE1Q9BRV8 207 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 RMI1Q9H9A7 625 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 DNAJC28Q9NX36 388 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 DLGAP2Q9P1A6 1054 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 HS3ST3A1Q9Y663 406 aa18.12■□□□□ 0.49
SNX17-201ENST00000233575 GOLGA8QA0A0J9YX86 632 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 GOLGA8OA6NCC3 632 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 GOLGA8NF8WBI6 632 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 SNUPNO95149 360 aaKnown RBP18.11■□□□□ 0.49
SNX17-201ENST00000233575 AP1S2P56377 157 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 ABI3BPQ7Z7G0 1075 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 PDZD3Q86UT5 571 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 CAMKK1Q8N5S9 505 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 CCT6BQ92526 530 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 SKA1Q96BD8 255 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 RILPQ96NA2 401 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 OR52B2Q96RD2 323 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 WWP1Q9H0M0 922 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 OPTCQ9UBM4 332 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 CACNA1IQ9P0X4 2223 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 A0A1W2PPC4 97 aa18.11■□□□□ 0.49
SNX17-201ENST00000233575 STK16O75716 305 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms