RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC2A7Q6PXP3 512 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 DDX1Q92499 740 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 COG8Q96MW5 612 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 PRKACGP22612 351 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 ARL2P36404 184 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 ATXN1P54253 815 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 HNRNPDQ14103 355 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 C9orf57Q5W0N0 161 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 TTYH2Q9BSA4 534 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 FUNDC2Q9BWH2 189 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 CPNE5Q9HCH3 593 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 RIPK3Q9Y572 518 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 PITPNAQ00169 270 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 FAM151BQ6UXP7 276 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ASB18Q6ZVZ8 466 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ESAMQ96AP7 390 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PIWIL1Q96J94 861 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 FAIM2Q9BWQ8 316 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 DSN1Q9H410 356 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CMAHPQ9Y471 501 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 GNB5O14775 395 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PLD2O14939 933 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SNNO75324 88 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 URODP06132 367 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 GRIA2P42262 883 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PIGFQ07326 219 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PIGGQ5H8A4 983 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 NCBP2-AS2Q69YL0 99 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 OOSP2Q86WS3 158 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PHACTR4Q8IZ21 702 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SPAG16Q8N0X2 631 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 RFKQ969G6 155 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 MIR1-1HGQ9H1L0 117 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 TAS2R9Q9NYW1 312 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PER2O15055 1255 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 OR6A2O95222 327 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SIX3O95343 332 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 DSC2Q02487 901 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CBLBQ13191 982 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 FAM91A1Q658Y4 838 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ALDH16A1Q8IZ83 802 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PLD6Q8N2A8 252 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ABHD11Q8NFV4 315 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 AARSD1Q9BTE6 412 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 C1QTNF1Q9BXJ1 281 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 NECTIN3Q9NQS3 549 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 STOMP27105 288 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PPP5CP53041 499 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 NUDT6P53370 316 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CXCL17Q6UXB2 119 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 ANKRD60Q9BZ19 345 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 WRAP73Q9P2S5 460 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SLC25A14O95258 325 aaPredicted RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 NDST3O95803 873 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SMIM10L2AP0DMW4 78 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 SMIM10L2BP0DMW5 78 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CXCR2P25025 360 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 KCNAB2Q13303 367 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CAND1Q86VP6 1230 aaKnown RBP13.57□□□□□ -0.24
HCFC2-201ENST00000229330 CHPFQ8IZ52 775 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 DNAJC11Q9NVH1 559 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
HCFC2-201ENST00000229330 MYH7BA7E2Y1 1941 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 DLGAP1O14490 977 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ALDH1A2O94788 518 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 FPR1P21462 350 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ITPKAP23677 461 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 CSTF2P33240 577 aaKnown RBP eCLIP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 MANFP55145 182 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 BPIFB1Q8TDL5 484 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 LGALS12Q96DT0 336 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ZNF486Q96H40 463 aaPredicted RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 OSGEPL1Q9H4B0 414 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 SGK2Q9HBY8 427 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 TVP23BQ9NYZ1 205 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 FAM86C2PA6NEL3 165 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 APOL3O95236 402 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 AHSGP02765 367 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 CSF2P04141 144 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 RPN2P04844 631 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 CTPS1P17812 591 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 MATN1P21941 496 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
HCFC2-201ENST00000229330 GSTM2P28161 218 aa13.56□□□□□ -0.24
HCFC2-201ENST00000229330 ACSL1P33121 698 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms