RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 UPK1AO00322 258 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 CA12O43570 354 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 GLUD1P00367 558 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 RAP2AP10114 183 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ITGALP20701 1170 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ALDH7A1P49419 539 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 TCTN1Q2MV58 587 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 NCEH1Q6PIU2 408 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 GTF2H4Q92759 462 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 FAM120BQ96EK7 910 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 EBPLQ9BY08 206 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ATG10Q9H0Y0 220 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 LRTM1Q9HBL6 345 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 SLC25A37Q9NYZ2 338 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 CD84Q9UIB8 345 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 BOLA2-SMG1P6H3BVE0 249 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 KLK8O60259 260 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 FTH1P02794 183 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 UMPSP11172 480 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ITPKAP23677 461 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 BOP1Q14137 746 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 BTG3Q14201 252 aaPredicted RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 SF1Q15637 639 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 BPIFB1Q8TDL5 484 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ASIC4Q96FT7 647 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 INPP5KQ9BT40 448 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 CXCR6O00574 342 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 RPLP2P05387 115 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 GNPDA1P46926 289 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 STK19P49842 368 aaPredicted RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 ALDH3A2P51648 485 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ADARB1P78563 741 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 ALG1LQ6GMV1 187 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PIWIL3Q7Z3Z3 882 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 TMEM179BQ7Z7N9 219 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PROSER1Q86XN7 944 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 C8orf59Q8N0T1 100 aaPredicted RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 TSPEARQ8WU66 669 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 SELENOMQ8WWX9 145 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PLGRKTQ9HBL7 147 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 HEBP1Q9NRV9 189 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 RIMKLBQ9ULI2 386 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 TNPO3Q9Y5L0 923 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 PATJQ8NI35 1801 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ELOVL7A1L3X0 281 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 H0Y858 1186 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 FSHRP23945 695 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 HMGCLP35914 325 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 BCL2L1Q07817 233 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 TSTA3Q13630 321 aaPredicted RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 CACHD1Q5VU97 1274 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 GALNT18Q6P9A2 607 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 MSRB3Q8IXL7 192 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 SLC22A17Q8WUG5 538 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 SNX19Q92543 992 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 APOLD1Q96LR9 279 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PPP3R2Q96LZ3 170 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 LHPPQ9H008 270 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ARMC7Q9H6L4 198 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 MBD1Q9UIS9 605 aaPredicted RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 ANKRD36A6QL64 1941 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ANKRD28O15084 1053 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 RGS14O43566 566 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 PQBP1O60828 265 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 SERPINA1P01009 418 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 ALPLP05186 524 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 EPB42P16452 691 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 HMGA1P17096 107 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 GGT1P19440 569 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 HNF1BP35680 557 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 HLCSP50747 726 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 IL5RAQ01344 420 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 FAM26DQ5JW98 314 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 RBM23Q86U06 439 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 SPATA17Q96L03 361 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 BARD1Q99728 777 aaKnown RBP8.12□□□□□ -1.11
CDC27-201ENST00000066544 AMBRA1Q9C0C7 1298 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 P2RY12Q9H244 342 aa8.12□□□□□ -1.11
CDC27-201ENST00000066544 H7C4K7 107 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 CKMP06732 381 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 CASP9P55211 416 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 PHEXP78562 749 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 CD47Q08722 323 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 NFATC2Q13469 925 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 DGCR6Q14129 220 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 ISG20Q96AZ6 181 aaKnown RBP8.11□□□□□ -1.11
CDC27-201ENST00000066544 PTBP2Q9UKA9 531 aaKnown RBP8.11□□□□□ -1.11
CDC27-201ENST00000066544 MYOFQ9NZM1 2061 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 BCKDHAP12694 445 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 BPIP17213 487 aa8.11□□□□□ -1.11
CDC27-201ENST00000066544 TUFMP49411 452 aaKnown RBP8.11□□□□□ -1.11
CDC27-201ENST00000066544 GRIK2Q13002 908 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms