RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PRR35P0CG20 571 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 NFKBIAP25963 317 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 CAPGP40121 348 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 C21orf59P57076 290 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 LAPTM5Q13571 262 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 TMTC4Q5T4D3 741 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 STK32CQ86UX6 486 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 HS3ST5Q8IZT8 346 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 STK40Q8N2I9 435 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 MFSD2AQ8NA29 543 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ZNF382Q96SR6 550 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 SPG21Q9NZD8 308 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 PKD2L2Q9NZM6 624 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
CTNS-201ENST00000046640 DGKBQ9Y6T7 804 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 PIKFYVEQ9Y2I7 2098 aa12.88□□□□□ -0.35
CTNS-201ENST00000046640 RAD51BO15315 384 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 CCL16O15467 120 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 VPS4BO75351 444 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ALBP02768 609 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 IL7RP16871 459 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 WEE1P30291 646 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 TPD52P55327 224 aaPredicted RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 AP1S1P61966 158 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 HSPA14Q0VDF9 509 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 SFSWAPQ12872 951 aaKnown RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTNS-201ENST00000046640 PLEKHG6Q3KR16 790 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 CYP20A1Q6UW02 462 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 Q6ZNB5 142 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 SNX20Q7Z614 316 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 PYCR2Q96C36 320 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 TBC1D23Q9NUY8 699 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 NUDT4Q9NZJ9 180 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 NOBOXO60393 691 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 UGT2B4P06133 528 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 CCL5P13501 91 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 HSD17B1P14061 328 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 RFC2P35250 354 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 BNIP2Q12982 314 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 SLC22A15Q8IZD6 547 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 NUSAP1Q9BXS6 441 aaKnown RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 DGCR6LQ9BY27 220 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 SEZ6LQ9BYH1 1024 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 STOML2Q9UJZ1 356 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 NOL3O60936 208 aaKnown RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 TCF3P15923 654 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ACRV1P26436 265 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 HLA-FP30511 346 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 SHMT2P34897 504 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 RGS4P49798 205 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 PRKG2Q13237 762 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ATP13A5Q4VNC0 1218 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 GLYATQ6IB77 296 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 CRTC1Q6UUV9 634 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 TCEAL8Q8IYN2 117 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ZBTB2Q8N680 514 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ST13P5Q8NFI4 369 aaPredicted RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 FBXO30Q8TB52 745 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 TBC1D15Q8TC07 691 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 BEGAINQ9BUH8 593 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 C1QTNF3Q9BXJ4 246 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 ATP13A3Q9H7F0 1226 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 DNMT3BQ9UBC3 853 aaKnown RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 GNPTGQ9UJJ9 305 aa12.87□□□□□ -0.35
CTNS-201ENST00000046640 LEF1Q9UJU2 399 aaPredicted RBP12.87□□□□□ -0.35
CTNS-201ENST00000046640 LOC730098B7Z3J9 87 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
CTNS-201ENST00000046640 LRG1P02750 347 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 NEK2P51955 445 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 TRAF3Q13114 568 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 CBX3Q13185 183 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 ITGADQ13349 1161 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 CERS6Q6ZMG9 384 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 OR10Q1Q8NGQ4 319 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 SORCS1Q8WY21 1168 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 PLEKHA8Q96JA3 519 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 TBCDQ9BTW9 1192 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 MTG2Q9H4K7 406 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 RETREG1Q9H6L5 497 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 PRM3Q9NNZ6 103 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 FAIMQ9NVQ4 179 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms