RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Zswim7Q9CWQ2 152 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 Dusp12Q9D0T2 339 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 4933402E13RikQ9D4D2 429 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 Phf10Q9D8M7 497 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 Irx4Q9QY61 515 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 Zkscan5Q9Z1D8 819 aa15.02■□□□□ -0
Hmgb1-208ENSMUST00000139443 Ints1Q6P4S8 2195 aa15.02□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 HelzQ6DFV5 1964 aaKnown RBP15.02□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 NbasE9Q411 2356 aa15.02□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fam171a2A2A699 822 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ttll9A2APC3 461 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Rhox1B1APN4 224 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tmem45a2B7ZWJ5 289 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tsc22d2E9Q7M2 769 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Sh2d1bO35324 132 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 B3galt1O54904 326 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 P01673 111 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 CtsaP16675 474 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Cxcl10P17515 98 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 EmbP21995 330 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Anp32eP97822 260 aaKnown RBP15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Glycam1Q02596 151 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Arntl2Q2VPD4 579 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tmem102Q3UPR7 509 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Sema3bQ62177 748 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tspyl5Q69ZB3 406 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Vmn2r26Q6TAC4 855 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Dna2Q6ZQJ5 1062 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Med26Q7TN02 588 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Chil6Q80W26 440 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ddrgk1Q80WW9 315 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tmem214Q8BM55 687 aaKnown RBP15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 HadhaQ8BMS1 763 aaKnown RBP15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Sdhaf3Q8BQU3 125 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 ItpkaQ8R071 459 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Pcdhb20Q91XZ9 799 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 LiasQ99M04 373 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Asf1aQ9CQE6 204 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Dnase1l1Q9D7J6 314 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Cbll1Q9JIY2 491 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fbxo8Q9QZN3 319 aa15.01□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tns1E9Q0S6 1888 aaKnown RBP15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Gm29394H3BIW7 199 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Gm6356L7N2A7 188 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Slc6a2O55192 617 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 WarsP32921 481 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Slc9a3r1P70441 355 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Grb7Q03160 535 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Arhgap45Q3TBD2 1116 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Krt26Q3TRJ4 462 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Atf7ip2Q3UL97 452 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Vps41Q5KU39 853 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Havcr1Q5QNS5 305 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Irak1Q62406 710 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Anp32cQ64G17 123 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Papd7Q6PB75 542 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 HjurpQ6PG16 667 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Dnajc6Q80TZ3 938 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fzd10Q8BKG4 582 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 PstkQ8BP74 359 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Gpat3Q8C0N2 438 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 SinhcafQ8C8M1 221 aaKnown RBP15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Armcx6Q8K3A6 301 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Usb1Q91W78 267 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 MrgprgQ91ZB5 289 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Tas1r2Q925I4 843 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 St13Q99L47 371 aaKnown RBP15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Cep19Q9CQA8 163 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Zdhhc4Q9D6H5 343 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ten1Q9D7K2 161 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Defb5Q9EPV9 64 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Scamp4Q9JKV5 230 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 PrepQ9QUR6 710 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Wnt16Q9QYS1 364 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 H2-BlV9GXR0 257 aa15□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Pcna-ps2A0A140T8V5 261 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Gpr161B2RPY5 545 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ppp1r36D3Z0R2 411 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Lrrc31F6VYM1 502 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Rgsl1H3BL40 1073 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Top3aO70157 1003 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 CebpbP28033 296 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Vps4bP46467 444 aaKnown RBP14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 MipP51180 263 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Pold1P52431 1105 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ldb1P70662 411 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Thumpd3P97770 505 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Atp13a5Q3TYU2 1216 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Mep1bQ61847 704 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fgfr3Q61851 801 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 AstlQ6HA09 435 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Utf1Q6J1H4 339 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Mfsd4aQ6PDC8 510 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fam107aQ78TU8 144 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Ttc29Q80VM3 471 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Znf76Q8BMU0 568 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Cdk5rap1Q8BTW8 588 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Klhl7Q8BUL5 586 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Fgfrl1Q91V87 529 aa14.99□□□□□ -0.01
Hmgb1-208ENSMUST00000139443 Mta3Q924K8 591 aa14.99□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms