RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm13128L7MU96 475 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Capn1O35350 713 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cops4O88544 406 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Pgk1P09411 417 aaKnown RBP11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Styk1Q6J9G1 429 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rem2Q8VEL9 341 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 ClpxQ9JHS4 634 aaKnown RBP11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Map2P20357 1828 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam155bA2BDP1 471 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 RptnP97347 1118 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gdpd4Q3TT99 632 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 CblbQ3TTA7 982 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 H2-Q2Q4KN81 360 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lcn10Q810Z1 182 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Wdr59Q8C0M0 992 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Sox30Q8CGW4 782 aa11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Uqcrc1Q9CZ13 480 aaKnown RBP11.77□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8020F6WLE9 229 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem173Q3TBT3 378 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mrgprb1Q3UG61 350 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Msi1Q61474 362 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Orai3Q6P8G8 290 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gramd1cQ8CI52 457 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 KptnQ8VCX6 430 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fastkd2Q922E6 689 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clp1Q99LI9 425 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pla2g12bQ99P27 195 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sertad3Q9ERC3 197 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 NapsaO09043 419 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prl6a1O35257 230 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 DsppP97399 934 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sema3gQ4LFA9 780 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fgfr3Q61851 801 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prpf38bQ80SY5 542 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem74Q8BQU7 305 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Usp43Q8BUM9 1132 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kcnk10Q8BUW1 535 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 PpcdcQ8BZB2 204 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Casp9Q8C3Q9 454 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clrn1Q8K445 232 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Trem2Q99NH8 227 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm16494E9Q2Z4 87 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Wnt3aP27467 352 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Capza1P47753 286 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Hp1bp3Q3TEA8 554 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Jak2Q62120 1129 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sdhaf3Q8BQU3 125 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tbc1d17Q8BYH7 645 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc5a9Q8VDT1 685 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tomm20Q9DCC8 145 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 AnkhQ9JHZ2 492 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zmynd12A2BGJ5 363 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mkln1O89050 735 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 PrlP06879 226 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ap2a1P17426 977 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Il18P70380 192 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sgpp2Q810K3 354 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Parp12Q8BZ20 711 aaKnown RBP11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sh3bp4Q921I6 962 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Chmp1aQ921W0 196 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Me2Q99KE1 589 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc25a54B1AUS6 473 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm6401L7N2C0 213 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prl7a1O54830 266 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cers1P27545 350 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fbp2P70695 339 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pkp4Q68FH0 1190 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam76bQ80XP8 339 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 PglsQ9CQ60 257 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kat8Q9D1P2 458 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc19a2Q9EQN9 498 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sh2b2Q9JID9 621 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mroh1E0CZ22 1640 aa11.77□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem236A2ARJ3 344 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sult3a2G5E904 293 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clk4O35493 481 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp2b9P12790 491 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 MafP54843 370 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Eif4bQ8BGD9 611 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Glt28d2Q8BML3 165 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kat2aQ9JHD2 830 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zbtb32Q9JKD9 465 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7929A0A286YDV3 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21103E9Q2Q1 267 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm21977F6U3N7 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8247F6VRJ8 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8005F6YKY3 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm3015F6ZAP6 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8212F6ZMY5 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm7954F7BAX1 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8138F7BY56 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8232F7CFJ3 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm17079F7D8Y4 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8094K7N6U8 211 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8165L7N218 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm8122L7N2C7 213 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm17078M0QW51 211 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tcea1P10711 301 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cfl2P45591 166 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ezh1P70351 747 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms