RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ttc36Q8VBW8 186 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Scpep1Q920A5 452 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Arid1aA2BH40 2283 aaKnown RBP16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Txnl4aP83877 142 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PepdQ11136 493 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc15a3Q8BPX9 578 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Csde1Q91W50 798 aaKnown RBP16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Uba2Q9Z1F9 638 aa16.36■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Lingo2Q3URE9 606 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Parp12Q8BZ20 711 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr818Q8VG46 318 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 MlycdQ99J39 492 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc7a8Q9QXW9 531 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Znf382B2RXC5 579 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 P06324 132 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Matn1P51942 500 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Foxr1Q3UTB7 268 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr1105Q7TR58 312 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tspan18Q80WR1 248 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Acsm1Q91VA0 573 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cstf1Q99LC2 431 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pgk1P09411 417 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gata5P97489 404 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PkdccQ5RJI4 492 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cypt2Q6P924 180 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cyp2d22Q9JKY7 500 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cyp2g1Q9WV19 494 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr520E9Q518 316 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dpysl4O35098 572 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nr2f6P43136 390 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 SgcdP82347 289 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mapk3Q63844 380 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Avl9Q80U56 649 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ufsp2Q99K23 461 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 UxtQ9WTZ0 157 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Nup54Q8BTS4 510 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dus1lQ8C2P3 475 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mau2Q9D2X5 619 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cmpk1Q9DBP5 196 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ggta1l1A2AUQ7 319 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 C87414E9PWI7 475 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Taar7aQ5QD12 358 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zdhhc19Q810M5 347 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Orai2Q8BH10 250 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mul1Q8VCM5 352 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gtf2e2Q9D902 292 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mllt3A2AM29 569 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Armc4B2RY50 1037 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm21560D3Z7A4 205 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm3138K7N754 218 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tnks2Q3UES3 1166 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Man2a2Q8BRK9 1152 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Map3k14Q9WUL6 942 aa16.35■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TomtA1Y9I9 258 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Flvcr1B2RXV4 560 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Acvr2aP27038 513 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 MslnQ61468 625 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rbm18Q9CR83 190 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Hddc3Q9D114 179 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ephx1Q9D379 455 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 P2yr13Q9D8I2 337 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tlr6Q9EPW9 795 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Akap11E9Q777 1895 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 FaimlJ3QPY3 178 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr618K7N6B3 318 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ndst2P52850 883 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Rad54bQ6PFE3 886 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 GatcQ8CBY0 155 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Angptl8Q8R1L8 198 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Prmt2Q9R144 448 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm37596A0A0A6YXL2 336 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gucy2dA0A0U1RPR8 1117 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cntnap3E9PY62 1287 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Elk4P41158 430 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 HmgcrQ01237 887 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pkp4Q68FH0 1190 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Fam221bQ8C627 487 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 SarafQ8R3Q0 334 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Borcs6Q9D6W8 360 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Smchd1Q6P5D8 2007 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Otud4B2RRE7 1107 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 4930558K02RikE0CXC6 182 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 StradaQ3UUJ4 431 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr49Q9Z1V0 313 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm21293E9Q4G9 266 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Scamp3O35609 349 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tnfsf4P43488 198 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ruvbl1P60122 456 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AasdhQ80WC9 1100 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 4930503B20RikQ80ZP0 234 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Chst12Q99LL3 419 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Acbd6Q9D061 282 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zscan4bE9Q3G0 505 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Kng1O08677 661 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cd48P18181 240 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Lypla1P97823 230 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Zswim5Q80TC6 1188 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Eif3kQ9DBZ5 218 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 TriobpQ99KW3 2014 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm7792A0A0J9YU01 481 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms