RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 F3P20352 294 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 CtskP55097 329 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hrh1P70174 488 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Emx1Q04742 257 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm7030Q0WXH6 285 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Naa11Q3UX61 218 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pou4f2Q63934 411 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dennd5aQ6PAL8 1287 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pcp4l1Q6W8Q3 68 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Abi3Q8BYZ1 367 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr183Q8VFB9 309 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc44a3Q921V7 656 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cstf3Q99LI7 717 aaKnown RBP11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trim13Q9CYB0 407 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pus10Q9D3U0 527 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ndst3Q9EQH7 873 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Mast2Q60592 1734 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ect2lA0A140LIP2 953 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rhox3cA2AWM0 215 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fam124aD3Z5V4 536 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fam181aJ3QNB7 292 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm3642K7N6V4 267 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rhox3hL7MU37 215 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm6401L7N2C0 213 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cma1P21844 247 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pcmt1P23506 227 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 TfamP40630 243 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dok6Q2MHE5 331 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rhox3aQ4TU90 215 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr1364Q5SZS9 314 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Trim62Q80V85 475 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 ClmpQ8R373 373 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Acsm1Q91VA0 573 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dap3Q9ER88 391 aaKnown RBP11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Il1rl2Q9ERS7 574 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Nek6Q9ES70 313 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 4930579F01RikE9Q3L6 325 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gm17019K7N6W5 255 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 AmbnO55189 407 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Npr1P18293 1057 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tap2P36371 702 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Alox5P48999 674 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Hdac2P70288 488 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gdpgp1Q3TLS3 386 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tmem181aQ3U3W2 474 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Q80Y39 304 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Atl1Q8BH66 558 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tbc1d10bQ8BHL3 798 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 LsampQ8BLK3 341 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Abi1Q8CBW3 481 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 MpstQ99J99 297 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rprd1bQ9CSU0 326 aaKnown RBP11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cxxc1Q9CWW7 660 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rnaseh2aQ9CWY8 301 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 AcadsbQ9DBL1 432 aa11.14□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ankle1A8VU90 534 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Daw1D3Z7A5 415 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Fbxw9F8VPX2 458 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tmigd3G3X8R9 209 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc9a3G3X939 829 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Sh3yl1O08641 340 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tp63O88898 680 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Parp8Q3UD82 852 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 C2cd4cC2CD4Q5HZI2 419 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Rapgefl1Q68EF8 662 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gpat3Q8C0N2 438 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ccdc17Q8CE13 565 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Zmiz2Q8CIE2 920 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tspan8Q8R3G9 235 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tex19.2Q9D5S1 317 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Prg3Q9JL95 222 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Clec2iQ9WVF9 217 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 NinQ61043 2035 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Olfr564E9PWA8 316 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Dcdc2bF7BCK0 340 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ikzf3O08900 507 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Yap1P46938 488 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tm9sf2P58021 662 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Kcnk2P97438 426 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Lsmem1Q3UQS2 128 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Lcp2Q60787 533 aaKnown RBP11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Bcl2l1Q64373 233 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Kir3dl2Q673W2 388 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Myl12aQ6ZWQ9 172 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Znf410Q8BKX7 478 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 CcsapQ8QZT2 252 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn1r38Q8R2E1 302 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Ska1Q9CPV1 254 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pinx1Q9CZX5 332 aaKnown RBP11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tlr6Q9EPW9 795 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Pin1Q9QUR7 165 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Aldoart2A6ZI47 364 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Vmn2r88L7N1W8 857 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Slc16a8O35308 492 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Clk4O35493 481 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Cyp2b19O55071 492 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Gnpda1O88958 289 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 EgfP01132 1217 aa11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Tuba3aP05214 450 aaKnown RBP11.13□□□□□ -0.63
Topbp1-201ENSMUST00000035164 Etv4P28322 485 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 64.9 ms