RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fam151bD3YUE4 279 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Vmn2r50E9PW61 861 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm3298E9PW80 205 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm3667K7N757 205 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Ptpn5P54830 541 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Mkl2P59759 1080 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 EpycP70186 322 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 MybphP70402 483 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp560Q3URI6 754 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Tmem255bQ5FW56 369 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gm3558Q5FWC9 205 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 SctrQ5FWI2 447 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Usp7Q6A4J8 1103 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pfkfb4Q6DTY7 469 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 GmppbQ8BTZ7 360 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Cars2Q8BYM8 551 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fastkd2Q922E6 689 aaKnown RBP18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Adgrl4Q923X1 739 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Atp6v1g1Q9CR51 118 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Slc6a14Q9JMA9 638 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Padi3Q9Z184 664 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Tbkbp1A2A9T0 611 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Mllt3A2AM29 569 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Nrp2O35375 931 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Gp1baO35930 734 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Sp1O89090 784 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 P01679 107 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 AprtP08030 180 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 SpnP15702 395 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Prdx3P20108 257 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 DsppP97399 934 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pfdn4Q3UWL8 134 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Fam189a1Q6A044 515 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr213Q7TS32 327 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Cpped1Q8BFS6 312 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp595Q8BIN6 625 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Tyw1Q8BJM7 721 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 SntnQ8C9X1 147 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 HnrnplQ8R081 586 aaKnown RBP18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr846Q8VET8 312 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Olfr606Q8VGZ8 319 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Uts2rQ8VIH9 385 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Diras1Q91Z61 198 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Pop5Q9DB28 169 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Vmn1r65Q9EPS7 332 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Kcne5Q9QZ26 143 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Adamts5Q9R001 930 aa18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Clic1Q9Z1Q5 241 aaKnown RBP18.4■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 PtprdQ64487 1912 aa18.39■□□□□ 0.54
Shkbp1-201ENSMUST00000003857 Zfp788E9Q980 884 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ces2hF6Z9B9 558 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm11236J3QMS7 360 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Vmn2r8L7N472 848 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Angpt2O35608 496 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Coro1aO89053 461 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 AldocP05063 363 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cdh1P09803 884 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Npy2rP97295 381 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Fbxw18Q3TSA9 469 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Znf366Q6NS86 746 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Clec7aQ6QLQ4 244 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ppp2r2bQ6ZWR4 443 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tas2r131Q7M708 310 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 MtdhQ80WJ7 579 aaKnown RBP18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tmem169Q8BG50 297 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 ChdhQ8BJ64 596 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Lacc1Q8BZT9 430 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Q8CC96 669 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ska2Q9CR46 120 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 FancgQ9EQR6 623 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 AgkQ9ESW4 421 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 SelenovD3YXG1 328 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm4871D3Z0W7 314 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gm20441G3UYJ7 252 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Map3k7clP58500 142 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Hdac2P70288 488 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pde7aP70453 456 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Mapkapk3Q3UMW7 384 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 GlyatQ91XE0 296 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Dpy30Q99LT0 99 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zswim1Q9CWV7 455 aaKnown RBP18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Slc39a5Q9D856 535 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Rcan2Q9JHG2 197 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Trip4Q9QXN3 581 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Pkp3Q9QY23 797 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Zbtb18Q9WUK6 522 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 PrebQ9WUQ2 417 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Smarcb1Q9Z0H3 385 aa18.39■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Sirpb1aA0A0A6YYP6 397 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cylc1A0A1B0GR13 642 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 9230113P08RikD3YWX3 137 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Gml2G5E8L7 176 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ackr2O08707 378 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Sod3O09164 251 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Tuba3aP05214 450 aaKnown RBP18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 SobpQ0P5V2 864 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Jmjd8Q3TA59 316 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Cdkn2cQ60772 168 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Ca4Q64444 305 aa18.38■□□□□ 0.53
Shkbp1-201ENSMUST00000003857 Prpf18Q8BM39 342 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms