RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FOXO6A8MYZ6 492 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 GFYI3L273 518 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 KIR2DS3K7RE56 304 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CDX4O14627 284 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SLC16A5O15375 505 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 EML2O95834 649 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 C8GP07360 202 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SLC35G4P0C7Q5 338 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 GIMD1P0DJR0 217 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 BRAFP15056 766 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CD1DP15813 335 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 KRT4P19013 534 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CCNFP41002 786 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CCT5P48643 541 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 DLG1Q12959 904 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SLC14A1Q13336 389 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CSHL1Q14406 222 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 KIR2DS5Q14953 304 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 ACAP2Q15057 778 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SF3A2Q15428 464 aaKnown RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 TCEA2Q15560 299 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 RPE65Q16518 533 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CLEC14AQ86T13 490 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 RASGRP3Q8IV61 690 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CENPLQ8N0S6 344 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 NAGSQ8N159 534 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 PLD6Q8N2A8 252 aaKnown RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 ZFPM2Q8WW38 1151 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 ASB11Q8WXH4 323 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 NXNL1Q96CM4 212 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 IGSF5Q9NSI5 407 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 NLGN3Q9NZ94 848 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
LINC00339-213ENST00000642137 HEBP2Q9Y5Z4 205 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 COLEC10Q9Y6Z7 277 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 BPTFQ12830 3046 aa12.03□□□□□ -0.48
LINC00339-213ENST00000642137 CABIN1Q9Y6J0 2220 aa12.02□□□□□ -0.48
LINC00339-213ENST00000642137 GOLGA8RI6L899 631 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ZBTB14O43829 449 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 PSIP1O75475 530 aaKnown RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ALPPL2P10696 532 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 NDUFS1P28331 727 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 CRHR1P34998 444 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SLC19A1P41440 591 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 IRF9Q00978 393 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 IL9RQ01113 521 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 NHLH1Q02575 133 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SEPT7Q16181 437 aaKnown RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 DEFB133Q30KQ1 61 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 C6orf132Q5T0Z8 1188 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 KLC3Q6P597 504 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 PRR23CQ6ZRP0 262 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 PIWIL4Q7Z3Z4 852 aaKnown RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ISCA2Q86U28 154 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SLC9B2Q86UD5 537 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 C17orf82Q86X59 251 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SRRM1Q8IYB3 904 aaKnown RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 TBC1D21Q8IYX1 336 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SFRP1Q8N474 314 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 BANPQ8N9N5 519 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 AVL9Q8NBF6 648 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 FBXO15Q8NCQ5 510 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 GPR156Q8NFN8 814 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 OR4C6Q8NH72 309 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 RHEBL1Q8TAI7 183 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 MAGEC3Q8TD91 643 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 KCTD4Q8WVF5 259 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SKA2Q8WVK7 121 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 KIAA1191Q96A73 305 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ARL8AQ96BM9 186 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 RMDN2Q96LZ7 410 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 C12orf66Q96MD2 445 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 GPR78Q96P69 363 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 FERD3LQ96RJ6 166 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SMC6Q96SB8 1091 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SLC12A9Q9BXP2 914 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 MVB12BQ9H7P6 319 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 SSU72Q9NP77 194 aaKnown RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 PCMTD2Q9NV79 361 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 MKS1Q9NXB0 559 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 ZNF624Q9P2J8 865 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-213ENST00000642137 POLG2Q9UHN1 485 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 GRID1Q9ULK0 1009 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 CUL9Q8IWT3 2517 aa12.02□□□□□ -0.49
LINC00339-213ENST00000642137 TRBV23OR9-2A0A075B6M9 112 aa12.01□□□□□ -0.49
LINC00339-213ENST00000642137 CDC7O00311 574 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms